RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SLC30A5Q8TAD4 765 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 FAM71BQ8TC56 605 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 STT3BQ8TCJ2 826 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 IPCEF1Q8WWN9 437 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 ATG4AQ8WYN0 398 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 FUBP1Q96AE4 644 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 OSBPL9Q96SU4 736 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 SORBS1Q9BX66 1292 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 ZNF703Q9H7S9 590 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 GBA2Q9HCG7 927 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 AGO4Q9HCK5 861 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 GALNT9Q9HCQ5 603 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 NECTIN3Q9NQS3 549 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 TM7SF3Q9NS93 570 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 TMEM74BQ9NUR3 256 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 LRFN1Q9P244 771 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 HPSEQ9Y251 543 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 TRGV11A0A075B6L2 103 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 F5H697 171 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 HNRNPDLO14979 420 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 PPM1DO15297 605 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 FOXD2O60548 495 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 TLR5O60602 858 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 INMTO95050 263 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 LMNAP02545 664 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 ITGA5P08648 1049 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 PCSK6P29122 969 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 HTR7P34969 479 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 RENBPP51606 427 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 PRKAG1P54619 331 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 CTSWP56202 376 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 ADAM17P78536 824 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 FPGSQ05932 587 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 EFEMP1Q12805 493 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 EIF2B5Q13144 721 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 POSTNQ15063 836 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 ZRSR2Q15696 482 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 SLC5A9Q2M3M2 681 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 DEPDC1Q5TB30 811 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 SP5Q6BEB4 398 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 MAVSQ7Z434 540 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 GPR149Q86SP6 731 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 C1orf210Q8IVY1 113 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 MYCBPAPQ8TBZ2 947 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 SLC25A43Q8WUT9 341 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 DVL3Q92997 716 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 PPP2R3CQ969Q6 453 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 MYEOVQ96EZ4 313 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 BOD1Q96IK1 185 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 SNX27Q96L92 541 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 MLST8Q9BVC4 326 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 C1QTNF3Q9BXJ4 246 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 TMEM120AQ9BXJ8 343 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 EIF2AQ9BY44 585 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 ACTRT3Q9BYD9 372 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 TRIM5Q9C035 493 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 AMBRA1Q9C0C7 1298 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 MYLK2Q9H1R3 596 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 SLC25A32Q9H2D1 315 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 TMEM8AQ9HCN3 771 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 FSCN3Q9NQT6 498 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 INTS13Q9NVM9 706 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 DACT1Q9NYF0 836 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 LPAR3Q9UBY5 353 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 RAPGEFL1Q9UHV5 662 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 CNOT11Q9UKZ1 510 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 NEU2Q9Y3R4 380 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 TESMINQ9Y4I5 508 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 HS3ST4Q9Y661 456 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 DGKBQ9Y6T7 804 aa3.27□□□□□ -1.89
SCARNA4-202ENST00000625402 hCG_1642624A0A1W2PR95 340 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 OR2W5A6NFC9 320 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 TMEM200CA6NKL6 621 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 AQP7P3A6NL99 342 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 VWC2LB2RUY7 222 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 IPO5O00410 1097 aaKnown RBP3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 CBFA2T3O75081 653 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 SOAT2O75908 522 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 FGAP02671 866 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 GYS1P13807 737 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 NPPBP16860 134 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 KLRK1P26718 216 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 SLC5A2P31639 672 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 UQCRC1P31930 480 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 BMPR1AP36894 532 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 MAGEA10P43363 369 aaPredicted RBP3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 PDE6CP51160 858 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 CLCN2P51788 898 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 ATXN1P54253 815 aaKnown RBP3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 KRTAP10-2P60368 255 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 TIAL1Q01085 375 aaKnown RBP eCLIP3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 GPS1Q13098 491 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 RAPGEF1Q13905 1077 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 PTK2BQ14289 1009 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 SF3B3Q15393 1217 aaKnown RBP3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 PDCD2Q16342 344 aaPredicted RBP3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 MAPKAPK3Q16644 382 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 LY6KQ17RY6 165 aa3.26□□□□□ -1.89
SCARNA4-202ENST00000625402 NRN1LQ496H8 165 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms