RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 NKX6-1P78426 367 aaPredicted RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 SNAPC2Q13487 334 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 NOMO2Q5JPE7 1267 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 EMC10Q5UCC4 262 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 PPP4R3AQ6IN85 833 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 NBPF5PQ86XG9 351 aaPredicted RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 PDSS2Q86YH6 399 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 RAVER1Q8IY67 606 aaKnown RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 NLGN4YQ8NFZ3 816 aaPredicted RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 CLIP3Q96DZ5 547 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 HSPBAP1Q96EW2 488 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 TMX3Q96JJ7 454 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 EPC1Q9H2F5 836 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 NRDE2Q9H7Z3 1164 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 RLIMQ9NVW2 624 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 CTTNBP2NLQ9P2B4 639 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 ANKRD6Q9Y2G4 727 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 LUC7L2Q9Y383 392 aaKnown RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 DNAH12Q6ZR08 3092 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 ASTN2O75129 1339 aaPredicted RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 KIF7Q2M1P5 1343 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 MUC3AQ02505 3323 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 A0A1B0GTW7 788 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 TCRBV7S2A1N4TA0A589 114 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 MYADML2A6NDP7 307 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 ADM5C9JUS6 153 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 E9PLN8 166 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 SPDEFO95238 335 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 STARD3NLO95772 234 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 ANXA1P04083 346 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 MTHFD1P11586 935 aaKnown RBP3.92□□□□□ -1.78
CDKL5-208ENST00000624953 FCER1AP12319 257 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 TYRP1P17643 537 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 VCAM1P19320 739 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 PRDX5P30044 214 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 ZEB1P37275 1124 aaPredicted RBP3.92□□□□□ -1.78
CDKL5-208ENST00000624953 GMPSP49915 693 aaPredicted RBP3.92□□□□□ -1.78
CDKL5-208ENST00000624953 RAB27AP51159 221 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 POU6F2P78424 691 aaPredicted RBP3.92□□□□□ -1.78
CDKL5-208ENST00000624953 TAP1Q03518 808 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 CYP2A13Q16696 494 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 CLEC4GQ6UXB4 293 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 Q6YL49 198 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 UBE3BQ7Z3V4 1068 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 MAPKAPK5Q8IW41 473 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 FAM43AQ8N2R8 423 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 FITM2Q8N6M3 262 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 RAB24Q969Q5 203 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 MVB12AQ96EY5 273 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 CLPTM1LQ96KA5 538 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 PHACTR3Q96KR7 559 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 COQ10AQ96MF6 247 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 KLHL32Q96NJ5 620 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 MED15Q96RN5 788 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 VKORC1Q9BQB6 163 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 ZNF341Q9BYN7 854 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 R3HDMLQ9H3Y0 253 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 RNPEPQ9H4A4 650 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 SERHL2Q9H4I8 314 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 SLITRK6Q9H5Y7 841 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 GPR35Q9HC97 309 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 ADARB2Q9NS39 739 aaKnown RBP3.92□□□□□ -1.78
CDKL5-208ENST00000624953 SAGE1Q9NXZ1 904 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 NIP7Q9Y221 180 aaKnown RBP eCLIP3.92□□□□□ -1.78
CDKL5-208ENST00000624953 USP15Q9Y4E8 981 aaPredicted RBP3.92□□□□□ -1.78
CDKL5-208ENST00000624953 FRMPD3Q5JV73 1810 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 REV3LO60673 3130 aa3.92□□□□□ -1.78
CDKL5-208ENST00000624953 MYH13Q9UKX3 1938 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 CDH23Q9H251 3354 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 RTL9Q8NET4 1388 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 IBTKQ9P2D0 1353 aaPredicted RBP3.91□□□□□ -1.78
CDKL5-208ENST00000624953 A0A1W2PS29 197 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 SSC5DA1L4H1 1573 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 TCERG1O14776 1098 aaKnown RBP3.91□□□□□ -1.78
CDKL5-208ENST00000624953 ERN1O75460 977 aaKnown RBP3.91□□□□□ -1.78
CDKL5-208ENST00000624953 ARIH2O95376 493 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 NTSR2O95665 410 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 ABHD16AO95870 558 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 CD1AP06126 327 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 SPATA31D3P0C874 917 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 DDX6P26196 483 aaKnown RBP eCLIP3.91□□□□□ -1.78
CDKL5-208ENST00000624953 ALDH1B1P30837 517 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 CYP2C19P33261 490 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 IL12RB1P42701 662 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 MAP2K6P52564 334 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 HUNKP57058 714 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 RAP2BP61225 183 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 BLOC1S1P78537 153 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 NOGQ13253 232 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 UAP1L1Q3KQV9 507 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 KHDC1Q4VXA5 237 aaKnown RBP3.91□□□□□ -1.78
CDKL5-208ENST00000624953 SUSD4Q5VX71 490 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 KIAA0895LQ68EN5 471 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 NXNQ6DKJ4 435 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 SLC4A10Q6U841 1118 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 SPATA31D4Q6ZUB0 917 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 EPM2AIP1Q7L775 607 aaPredicted RBP3.91□□□□□ -1.78
CDKL5-208ENST00000624953 PPP1R32Q7Z5V6 425 aa3.91□□□□□ -1.78
CDKL5-208ENST00000624953 CTU1Q7Z7A3 348 aaKnown RBP3.91□□□□□ -1.78
CDKL5-208ENST00000624953 RASAL3Q86YV0 1011 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms