RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 BRDTQ58F21 947 aaPredicted RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 WDR44Q5JSH3 913 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 C15orf39Q6ZRI6 1047 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 CDHR3Q6ZTQ4 885 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 ADGRG6Q86SQ4 1221 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 LCA5Q86VQ0 697 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 SPATA24Q86W54 205 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 IGDCC3Q8IVU1 814 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 ARID3BQ8IVW6 561 aaPredicted RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 C7orf26Q96N11 449 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 SRPK1Q96SB4 655 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 MECRQ9BV79 373 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 MIS12Q9H081 205 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 WWP1Q9H0M0 922 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 XPO7Q9UIA9 1087 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 MYH9P35579 1960 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 LTBP1Q14766 1721 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 PPEF1O14829 653 aaPredicted RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 INHBAP08476 426 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 PIM1P11309 404 aaPredicted RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 ALDH18A1P54886 795 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 DYNLT1P63172 113 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 ZNF200P98182 395 aaPredicted RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 OGDHQ02218 1023 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 BST1Q10588 318 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 UGCGQ16739 394 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 LRRC36Q1X8D7 754 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 KBTBD12Q3ZCT8 623 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 SFT2D3Q587I9 215 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 TMEM270Q6UE05 265 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 DHDDSQ86SQ9 333 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 GPD1LQ8N335 351 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 GSTCDQ8NEC7 633 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 SLC44A1Q8WWI5 657 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 ACAP3Q96P50 834 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 FAM213AQ9BRX8 229 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 CCDC106Q9BWC9 280 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 IQCGQ9H095 443 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 ZNF395Q9H8N7 513 aaPredicted RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 G3BP2Q9UN86 482 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 PPME1Q9Y570 386 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 TCRBV9S1A1TA0A576 114 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 MEI4A8MW99 385 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 PRR5-ARHGAP8B1AHC4 643 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 COPEO14579 308 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 HLA-DRAP01903 254 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 VAV1P15498 845 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 TSHRP16473 764 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 AQP5P55064 265 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 SH3BGRP55822 239 aaPredicted RBP14.73□□□□□ -0.05
LDB3-209ENST00000623056 ARHGAP8P85298 464 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 TMPRSS15P98073 1019 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 MSLNQ13421 630 aaPredicted RBP14.73□□□□□ -0.05
LDB3-209ENST00000623056 MED21Q13503 144 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 GRM2Q14416 872 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 CES4AQ5XG92 561 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 PLA2G4FQ68DD2 849 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 AAGABQ6PD74 315 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 NLGN1Q8N2Q7 840 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 ANKRD31Q8N7Z5 1873 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 ACTL9Q8TC94 416 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 PYDC1Q8WXC3 89 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 HIC2Q96JB3 615 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 MCEEQ96PE7 176 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 PREBQ9HCU5 417 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 ETNK2Q9NVF9 386 aa14.73□□□□□ -0.05
LDB3-209ENST00000623056 CHCHD3Q9NX63 227 aaKnown RBP14.73□□□□□ -0.05
LDB3-209ENST00000623056 ASTN2O75129 1339 aaPredicted RBP14.73□□□□□ -0.05
LDB3-209ENST00000623056 A0A088AWK7 358 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 KLRG2A4D1S0 409 aaPredicted RBP14.72□□□□□ -0.05
LDB3-209ENST00000623056 ZNF862O60290 1169 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 LYPLA2O95372 231 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 UQCRBP14927 111 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 PDE1BQ01064 536 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 OTUD4Q01804 1114 aaKnown RBP14.72□□□□□ -0.05
LDB3-209ENST00000623056 ASPHQ12797 758 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 DMP1Q13316 513 aaPredicted RBP14.72□□□□□ -0.05
LDB3-209ENST00000623056 MYBPC3Q14896 1274 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 LPCAT4Q643R3 524 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 RNF111Q6ZNA4 994 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 SATL1Q86VE3 508 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 C1orf21Q9H246 121 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 KMT5AQ9NQR1 393 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 MARCOQ9UEW3 520 aaPredicted RBP14.72□□□□□ -0.05
LDB3-209ENST00000623056 MRPL11Q9Y3B7 192 aaKnown RBP14.72□□□□□ -0.05
LDB3-209ENST00000623056 CCDC195A0A1B0GUA6 201 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 KITP10721 976 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 MMP8P22894 467 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 CPOXP36551 454 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 ELK3P41970 407 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 UBAP2LQ14157 1087 aaKnown RBP14.72□□□□□ -0.05
LDB3-209ENST00000623056 TBCCQ15814 346 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 XKR9Q5GH70 373 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 BSNDQ8WZ55 320 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 E2F7Q96AV8 911 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 ZDHHC15Q96MV8 337 aa14.72□□□□□ -0.05
LDB3-209ENST00000623056 DDX56Q9NY93 547 aaKnown RBP14.72□□□□□ -0.05
LDB3-209ENST00000623056 SMIM31A0A1B0GVY4 71 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms