RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 GPR65Q8IYL9 337 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 ATAD1Q8NBU5 361 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 RFFLQ8WZ73 363 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 KCNK16Q96T55 309 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 SLC4A5Q9BY07 1137 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 NKX2-4Q9H2Z4 354 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 DMAP1Q9NPF5 467 aaPredicted RBP18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 TMEM30AQ9NV96 361 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CHORDC1Q9UHD1 332 aaPredicted RBP18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 STRIP2Q9ULQ0 834 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 PAXBP1Q9Y5B6 917 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 PATJQ8NI35 1801 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 MTMR11A4FU01 709 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 BTNL10A8MVZ5 291 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 E5RJQ4 531 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 CSPG5O95196 566 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 NAP1L1P55209 391 aaKnown RBP18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 SNX16P57768 344 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 ERVK-21P61565 698 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 CREMQ03060 361 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 LLGL2Q6P1M3 1020 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 NYAP1Q6ZVC0 841 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 SPPL3Q8TCT6 385 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 POF1BQ8WVV4 589 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 HSFY1Q96LI6 401 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 TCF25Q9BQ70 676 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 MIS12Q9H081 205 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 ABCB6Q9NP58 842 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 AVENQ9NQS1 362 aaPredicted RBP18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 ENTPD7Q9NQZ7 604 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 CTTNBP2NLQ9P2B4 639 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 SALL4Q9UJQ4 1053 aa18.79■□□□□ 0.6
PTCHD3-202ENST00000622555 A0A0A6YYK5 440 aaPredicted RBP18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 WDR27A2RRH5 827 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 GRIK1P39086 918 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 NOP2P46087 812 aaKnown RBP18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 GABRB2P47870 512 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 UBE3AQ05086 875 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 SCN4BQ8IWT1 228 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 ZMIZ2Q8NF64 920 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 SLC35G2Q8TBE7 412 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 SPPL2BQ8TCT7 592 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 C2orf15Q8WU43 125 aaKnown RBP18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 NUP85Q9BW27 656 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 CSNK1G1Q9HCP0 422 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 CYLDQ9NQC7 956 aa18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 TNRC18O15417 2968 aaPredicted RBP18.78■□□□□ 0.6
PTCHD3-202ENST00000622555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 F8VP50 259 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 BUB1O43683 1085 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 LILRB3O75022 631 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 CXCL14O95715 111 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 LCP1P13796 627 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 ACADSBP45954 432 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 PPP2R2DQ66LE6 453 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 VSTM1Q6UX27 236 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 TMEM110Q86TL2 294 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 XYLT1Q86Y38 959 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 RHOT2Q8IXI1 618 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 MYRIPQ8NFW9 859 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 TLR9Q9NR96 1032 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 FNIP2Q9P278 1114 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 WDR35Q9P2L0 1181 aa18.77■□□□□ 0.6
PTCHD3-202ENST00000622555 GOLGA8SH3BPF8 625 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 GRM6O15303 877 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 TEX28O15482 410 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 KIF5CO60282 957 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 GABBR2O75899 941 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 MOCS3O95396 460 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 VNN2O95498 520 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 DNAJB1P25685 340 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 MAGEA11P43364 429 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 RPL34P49207 117 aaKnown RBP18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 NDUFV1P49821 464 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 ERVFC1P60507 584 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 ADCY1Q08828 1119 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 PLPP4Q5VZY2 271 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 OR6B2Q6IFH4 312 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 PLEKHA7Q6IQ23 1121 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 DNAJC24Q6P3W2 148 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 CHRDL2Q6WN34 429 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 TTC9BQ8N6N2 239 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 KCTD13Q8WZ19 329 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 C16orf45Q96MC5 204 aaPredicted RBP18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 IRX2Q9BZI1 471 aaPredicted RBP18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 UBXN6Q9BZV1 441 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 CERS4Q9HA82 394 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 LRRC4Q9HBW1 653 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 RXFP1Q9HBX9 757 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 OSGEPQ9NPF4 335 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 PARVAQ9NVD7 372 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 UVRAGQ9P2Y5 699 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 SLC27A5Q9Y2P5 690 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 SCINQ9Y6U3 715 aa18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 LAMA2P24043 3122 aaKnown RBP18.77■□□□□ 0.59
PTCHD3-202ENST00000622555 ADIGQ0VDE8 80 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 GPM6BQ13491 265 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 MAMLD1Q13495 774 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms