RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RPL26L1Q9UNX3 145 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 DNAJC25-GNG10A0A024R161 153 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 LACTBL1A8MY62 500 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 GPR25O00155 361 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 C2CD2LO14523 706 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 DPYSL4O14531 572 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 TRAFD1O14545 582 aaPredicted RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 MCF2LO15068 1137 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 B4GALT5O43286 388 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 HNRNPCL1O60812 293 aaKnown RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 BANF1O75531 89 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 SPAG6O75602 509 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 RNF8O76064 485 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 TMEM63AO94886 807 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 IL1BP01584 269 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 DHRS4L1P0CG22 281 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 ATP2A2P16615 1042 aaKnown RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 GPD1P21695 349 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 SSTR1P30872 391 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 GBP2P32456 591 aaPredicted RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 ELF1P32519 619 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 GPD2P43304 727 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 RAP1GAPP47736 663 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZNF143P52747 638 aaPredicted RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 CDH8P55286 799 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 DYNLT1P63172 113 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC18A2Q05940 514 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 VGLL4Q14135 290 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 KCNJ11Q14654 390 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 E2F5Q15329 346 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZNF484Q5JVG2 852 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 HP1BP3Q5SSJ5 553 aaPredicted RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 CCDC62Q6P9F0 684 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 C3orf62Q6ZUJ4 267 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 CYP4V2Q6ZWL3 525 aaPredicted RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 ILDR2Q71H61 639 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 OTOAQ7RTW8 1153 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 CHSY1Q86X52 802 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 NCAPG2Q86XI2 1143 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 VSIG1Q86XK7 387 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 RHPN2Q8IUC4 686 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 PALM2Q8IXS6 379 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 PDIK1LQ8N165 341 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 CEP120Q8N960 986 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 KCTD6Q8NC69 237 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 FBXO36Q8NEA4 188 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 SH3TC2Q8TF17 1288 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 UTP4Q969X6 686 aaKnown RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 RTP4Q96DX8 246 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 TWNKQ96RR1 684 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 CYTH2Q99418 400 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 PAFAH2Q99487 392 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 CNPY3Q9BT09 278 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 MIS12Q9H081 205 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 ASB7Q9H672 318 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 TLE6Q9H808 572 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 SAR1AQ9NR31 198 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 NOP53Q9NZM5 478 aaKnown RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 TRIM33Q9UPN9 1127 aa10.06□□□□□ -0.8
IGHV3-54-201ENST00000622166 POLR2AP24928 1970 aaKnown RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 A0A0G2JLL6 359 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 IQANK1A0A1B0GTG1 560 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 TCRBV7S3A2A0A539 114 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CFAP69A5D8W1 941 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 GOLGA8MH3BSY2 632 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 INO80B-WBP1J3KQ70 363 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CHADO15335 359 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 PEX10O60683 326 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 NFICP08651 508 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 GSTA2P09210 222 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CD48P09326 243 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 STAG3L1P0CL83 205 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 T-ENOLP0DO92 83 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CXCL8P10145 99 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 RBP3P10745 1247 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 P4HA1P13674 534 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 KRT4P19013 534 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 MARK3P27448 753 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 MAGEA6P43360 314 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 PHKA2P46019 1235 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 NEK3P51956 506 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CCNG1P51959 295 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 HIRAP54198 1017 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 ROR1Q01973 937 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 INCA1Q0VD86 236 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 EFTUD2Q15029 972 aaKnown RBP eCLIP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 PDK2Q15119 407 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 STILQ15468 1287 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 AMHR2Q16671 573 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 SMTNL2Q2TAL5 461 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 BBS9Q3SYG4 887 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 FYB2Q5VWT5 728 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 EFCAB12Q6NXP0 572 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CAPN12Q6ZSI9 719 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 SH2D5Q6ZV89 423 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms