RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 JAMLQ86YT9 394 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 TPCN2Q8NHX9 752 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ANKRD7Q92527 254 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ZNF558Q96NG5 402 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ZBTB18Q99592 522 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 TRIM55Q9BYV6 548 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 DMAP1Q9NPF5 467 aaPredicted RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 ARHGEF38Q9NXL2 777 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ARHGAP20Q9P2F6 1191 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 SLC13A4Q9UKG4 626 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 AP4E1Q9UPM8 1137 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 GNGT2O14610 69 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 CTIFO43310 598 aaKnown RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 TSPAN3O60637 253 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 MAFO75444 373 aaPredicted RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 HOXC6P09630 235 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ESRRAP11474 423 aaPredicted RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 YWHAZP63104 245 aaKnown RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 FAM133BQ5BKY9 247 aaKnown RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 CDKAL1Q5VV42 579 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 PLPPR4Q7Z2D5 763 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 NECAB2Q7Z6G3 386 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ITIH5Q86UX2 942 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 MFN1Q8IWA4 741 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 TMEM161BQ8NDZ6 487 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ZNF518BQ9C0D4 1074 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 C20orf96Q9NUD7 363 aaPredicted RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 SYNDIG1LA6NDD5 238 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 LZTS3O60299 673 aaPredicted RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 FBXO21O94952 628 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 RHOCP08134 193 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CHRM3P20309 590 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 YWHAQP27348 245 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CTNNB1P35222 781 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 TUFMP49411 452 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 PDAP1Q13442 181 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 CBWD6Q4V339 395 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 SYTL3Q4VX76 610 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CBWD3Q5JTY5 395 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CBWD5Q5RIA9 395 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 MTHFD1LQ6UB35 978 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 SLC13A5Q86YT5 568 aaPredicted RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 MTMR14Q8NCE2 650 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 COG1Q8WTW3 980 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CELF6Q96J87 481 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 KLF6Q99612 283 aaPredicted RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 APOL5Q9BWW9 433 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 FBXO44Q9H4M3 255 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 TLR8Q9NR97 1041 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 SLC25A13Q9UJS0 675 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CAPN6Q9Y6Q1 641 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 UMODL1Q5DID0 1318 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 GTPBP10A4D1E9 387 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 WNT7AO00755 349 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 FARP2O94887 1054 aaPredicted RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 NFICP08651 508 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 MAP4P27816 1152 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 CCR1P32246 355 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 GGCXP38435 758 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 PTENP60484 403 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 PPP3CAQ08209 521 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 C3orf62Q6ZUJ4 267 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
GGA3-223ENST00000621870 OTOP2Q7RTS6 562 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 ARHGEF19Q8IW93 802 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 HIPK4Q8NE63 616 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 ETNPPLQ8TBG4 499 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 TFB1MQ8WVM0 346 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 ACP6Q9NPH0 428 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CRLS1Q9UJA2 301 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 USP18Q9UMW8 372 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 PKP3Q9Y446 797 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CYP3A7-CYP3A51PA0A087WV96 503 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 LRRIQ3A6PVS8 624 aaPredicted RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 GSTA4O15217 222 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CA12O43570 354 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 RALBP11234 206 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CYP3A7P24462 503 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CCDC15Q0P6D6 951 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 FUT2Q10981 343 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 UGP2Q16851 508 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 FIGNQ5HY92 759 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 NOMO2Q5JPE7 1267 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 NAPEPLDQ6IQ20 393 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 ZNF384Q8TF68 577 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 RSRC1Q96IZ7 334 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 FOPNLQ96NB1 174 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 EMILIN2Q9BXX0 1053 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 CPSF2Q9P2I0 782 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 MSRAQ9UJ68 235 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 INTUQ9ULD6 942 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 TPX2Q9ULW0 747 aaKnown RBP9.61□□□□□ -0.87
GGA3-223ENST00000621870 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
GGA3-223ENST00000621870 TREHO43280 583 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 TOMM70O94826 608 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 CCNE2O96020 404 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 KCNA2P16389 499 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ARF4P18085 180 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms