RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 FBXL13Q8NEE6 735 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 PJA1Q8NG27 643 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 SEMA4DQ92854 862 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 TRMT2BQ96GJ1 504 aaKnown RBP17.01■□□□□ 0.31
BRCA1-228ENST00000618469 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
BRCA1-228ENST00000618469 GBP4Q96PP9 640 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 DUSP9Q99956 384 aaKnown RBP17.01■□□□□ 0.31
BRCA1-228ENST00000618469 MED10Q9BTT4 135 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 BCO2Q9BYV7 579 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 CLSTN2Q9H4D0 955 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 TASP1Q9H6P5 420 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 SPATA6Q9NWH7 488 aaPredicted RBP17.01■□□□□ 0.31
BRCA1-228ENST00000618469 UXTQ9UBK9 157 aaPredicted RBP17.01■□□□□ 0.31
BRCA1-228ENST00000618469 TICRRQ7Z2Z1 1910 aa17.01■□□□□ 0.31
BRCA1-228ENST00000618469 DCDC2BA2VCK2 349 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 F8VP50 259 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 CLDN5O00501 218 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 TADA3O75528 432 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 PRAMEF12O95522 483 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 CD58P19256 250 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 ATXN1P54253 815 aaKnown RBP17■□□□□ 0.31
BRCA1-228ENST00000618469 CACNA2D1P54289 1103 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 MCCD1P59942 119 aaPredicted RBP17■□□□□ 0.31
BRCA1-228ENST00000618469 PFKPQ01813 784 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 CSTF1Q05048 431 aaKnown RBP17■□□□□ 0.31
BRCA1-228ENST00000618469 TMEM150AQ86TG1 271 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 ACOT1Q86TX2 421 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 GPIHBP1Q8IV16 184 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 ARID3BQ8IVW6 561 aaPredicted RBP17■□□□□ 0.31
BRCA1-228ENST00000618469 DEPDC1BQ8WUY9 529 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 MRPS31Q92665 395 aaKnown RBP17■□□□□ 0.31
BRCA1-228ENST00000618469 SLC35C1Q96A29 364 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 RSPRY1Q96DX4 576 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 TRPV4Q9HBA0 871 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 METTL14Q9HCE5 456 aaKnown RBP17■□□□□ 0.31
BRCA1-228ENST00000618469 RAB20Q9NX57 234 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 EPG5Q9HCE0 2579 aa17■□□□□ 0.31
BRCA1-228ENST00000618469 PATJQ8NI35 1801 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 HEPACAM2A8MVW5 462 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 F11P03951 625 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 PSMC3P17980 439 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 GDI1P31150 447 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 INCA1Q0VD86 236 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 UBXN2BQ14CS0 331 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 FOXR2Q6PJQ5 311 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 TSSK4Q6SA08 328 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 UNC93AQ86WB7 457 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 SPATA17Q96L03 361 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 MYRFLQ96LU7 910 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 TWNKQ96RR1 684 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 TRMT61BQ9BVS5 477 aaKnown RBP16.99■□□□□ 0.31
BRCA1-228ENST00000618469 SMG9Q9H0W8 520 aaKnown RBP16.99■□□□□ 0.31
BRCA1-228ENST00000618469 BRD9Q9H8M2 597 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 CYP3A43Q9HB55 503 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 KRT82Q9NSB4 513 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 FAM49BQ9NUQ9 324 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 TMEM30AQ9NV96 361 aa16.99■□□□□ 0.31
BRCA1-228ENST00000618469 KIF26AQ9ULI4 1882 aaPredicted RBP16.99■□□□□ 0.31
BRCA1-228ENST00000618469 ZNF638Q14966 1978 aaKnown RBP16.98■□□□□ 0.31
BRCA1-228ENST00000618469 DPYSL4O14531 572 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 CCDC130P13994 396 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 TRIM21P19474 475 aaKnown RBP16.98■□□□□ 0.31
BRCA1-228ENST00000618469 DDX6P26196 483 aaKnown RBP eCLIP16.98■□□□□ 0.31
BRCA1-228ENST00000618469 AVPR1AP37288 418 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 IFRD2Q12894 506 aaPredicted RBP16.98■□□□□ 0.31
BRCA1-228ENST00000618469 MLF2Q15773 248 aaPredicted RBP16.98■□□□□ 0.31
BRCA1-228ENST00000618469 TXNDC8Q6A555 127 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 FILIP1Q7Z7B0 1213 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 MAB21L3Q8N8X9 362 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 E2F7Q96AV8 911 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 SMARCD1Q96GM5 515 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 C8orf48Q96LL4 319 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 CEP295NLQ96MC4 621 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 ARID3AQ99856 593 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 SLC46A2Q9BY10 475 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 TRPC7Q9HCX4 862 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 LMBRD1Q9NUN5 540 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 ZMYM5Q9UJ78 669 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 MYO16Q9Y6X6 1858 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 HELZP42694 1942 aaKnown RBP16.98■□□□□ 0.31
BRCA1-228ENST00000618469 ANAPC1Q9H1A4 1944 aa16.98■□□□□ 0.31
BRCA1-228ENST00000618469 KMT2BQ9UMN6 2715 aaPredicted RBP16.98■□□□□ 0.31
BRCA1-228ENST00000618469 FMO5P49326 533 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 USP46P62068 366 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 WDR44Q5JSH3 913 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 MFSD6LQ8IWD5 586 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 YAF2Q8IY57 180 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 CMTM8Q8IZV2 173 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 FUKQ8N0W3 1084 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 SLC2A14Q8TDB8 520 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 DNASE1L2Q92874 299 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 NT5C1AQ9BXI3 368 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 DMAP1Q9NPF5 467 aaPredicted RBP16.97■□□□□ 0.31
BRCA1-228ENST00000618469 HEBP1Q9NRV9 189 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 EHD2Q9NZN4 543 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 MYH10P35580 1976 aa16.97■□□□□ 0.31
BRCA1-228ENST00000618469 ZNF263O14978 683 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms