RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 NFE2Q16621 373 aaPredicted RBP14.49□□□□□ -0.09
CIITA-213ENST00000618327 FAM71DQ8N9W8 422 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 TRPV6Q9H1D0 765 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 XPNPEP1Q9NQW7 623 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 TAS2R14Q9NYV8 317 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 XPO7Q9UIA9 1087 aaKnown RBP14.49□□□□□ -0.09
CIITA-213ENST00000618327 MID2Q9UJV3 735 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 SMIM35A0A1B0GVV1 85 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 MYO1CO00159 1063 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 YWHAHQ04917 246 aaPredicted RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 PDK2Q15119 407 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 HIBCHQ6NVY1 386 aaPredicted RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 IRF2BP2Q7Z5L9 587 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 HNRNPLLQ8WVV9 542 aaKnown RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 CATSPERBQ9H7T0 1116 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 NHSQ6T4R5 1651 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 A0A0U1RQJ8 604 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 SMPD1P17405 629 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 TKTL1P51854 596 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 NBPF20Q3BBV1 942 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 TAF1BQ53T94 588 aaPredicted RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 RAB44Q7Z6P3 723 aaPredicted RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 NT5DC3Q86UY8 548 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 LNX1Q8TBB1 728 aaPredicted RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 TXNRD2Q9NNW7 524 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 AAASQ9NRG9 546 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 PCDHGC5Q9Y5F6 944 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 COL2A1P02458 1487 aaPredicted RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 SPECC1L-ADORA2AF8WAN1 911 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 OPLAHO14841 1288 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 STIP1P31948 543 aaKnown RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 ZNF280DQ6N043 979 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 WDR93Q6P2C0 686 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 MCUQ8NE86 351 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 FAM84AQ96KN4 292 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 ATP9BO43861 1147 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 ELAVL2Q12926 359 aaKnown RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 FAM131BQ86XD5 332 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 HSD3B7Q9H2F3 369 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 GPATCH2LQ9NWQ4 482 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 LSM7Q9UK45 103 aaKnown RBP14.48□□□□□ -0.09
CIITA-213ENST00000618327 UMODL1Q5DID0 1318 aa14.48□□□□□ -0.09
CIITA-213ENST00000618327 ADAMTS7Q9UKP4 1686 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 C3orf70A6NLC5 250 aaPredicted RBP14.47□□□□□ -0.09
CIITA-213ENST00000618327 FKTNO75072 461 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 CALCAP01258 141 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 YBX3P16989 372 aaKnown RBP eCLIP14.47□□□□□ -0.09
CIITA-213ENST00000618327 NFKBIAP25963 317 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 MLH1P40692 756 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 SPOCD1Q6ZMY3 1216 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 SLC2A14Q8TDB8 520 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 USP33Q8TEY7 942 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 CASKIN2Q8WXE0 1202 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 TTC17Q96AE7 1141 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 CYTH2Q99418 400 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 DMGDHQ9UI17 866 aaKnown RBP14.47□□□□□ -0.09
CIITA-213ENST00000618327 ANKRD36CQ5JPF3 1778 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 SMAPO00193 183 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 PPFIA2O75334 1257 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 GRM5P41594 1212 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 COPS2P61201 443 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 ASS1P00966 412 aaKnown RBP14.47□□□□□ -0.09
CIITA-213ENST00000618327 PPARGP37231 505 aaPredicted RBP14.47□□□□□ -0.09
CIITA-213ENST00000618327 SCNN1GP51170 649 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 ANO4Q32M45 955 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 SLFN11Q7Z7L1 901 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 PABPC5Q96DU9 382 aaKnown RBP14.47□□□□□ -0.09
CIITA-213ENST00000618327 SENP8Q96LD8 212 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 FRMD8P1Q9BZ68 369 aaPredicted RBP14.47□□□□□ -0.09
CIITA-213ENST00000618327 ST3GAL5Q9UNP4 418 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 S100BP04271 92 aaPredicted RBP14.47□□□□□ -0.09
CIITA-213ENST00000618327 SLC2A3P11169 496 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 ELNP15502 786 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 LRIG3Q6UXM1 1119 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 RAPGEF5Q92565 580 aa14.47□□□□□ -0.09
CIITA-213ENST00000618327 RCCD1A6NED2 376 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 TLR2O60603 784 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 PAPOLAP51003 745 aaKnown RBP14.46□□□□□ -0.09
CIITA-213ENST00000618327 CHSY1Q86X52 802 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 ZDHHC17Q8IUH5 632 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 C3orf20Q8ND61 904 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 FBXO32Q969P5 355 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 SLC45A1Q9Y2W3 748 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 TBKBP1A7MCY6 615 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 DUSP11O75319 330 aaKnown RBP14.46□□□□□ -0.09
CIITA-213ENST00000618327 NNMTP40261 264 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 KYNUQ16719 465 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 TSHZ1Q6ZSZ6 1077 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 UNC93AQ86WB7 457 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 N4BP2L2Q92802 583 aaPredicted RBP14.46□□□□□ -0.09
CIITA-213ENST00000618327 SEMA4DQ92854 862 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 NTPCRQ9BSD7 190 aaKnown RBP14.46□□□□□ -0.09
CIITA-213ENST00000618327 VPS11Q9H270 941 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 ACTR5Q9H9F9 607 aaPredicted RBP14.46□□□□□ -0.09
CIITA-213ENST00000618327 ZC3H7BQ9UGR2 993 aaKnown RBP14.46□□□□□ -0.09
CIITA-213ENST00000618327 AP4E1Q9UPM8 1137 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 PCDHA3Q9Y5H8 950 aa14.46□□□□□ -0.09
CIITA-213ENST00000618327 DARSP14868 501 aaKnown RBP14.46□□□□□ -0.1
CIITA-213ENST00000618327 MAGEA4P43358 317 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms