RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CBWD6Q4V339 395 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CBWD3Q5JTY5 395 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CBWD5Q5RIA9 395 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 SEC14L1Q92503 715 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 MSTO1Q9BUK6 570 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CARD9Q9H257 536 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 AGO2Q9UKV8 859 aaKnown RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 STYXL1Q9Y6J8 313 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CNTNAP2Q9UHC6 1331 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 DDX3YO15523 660 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 TSPAN1O60635 241 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 ATP5HO75947 161 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 CHRNA1P02708 482 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 SNRNP35Q16560 246 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 GPD1LQ8N335 351 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 DIS3LQ8TF46 1054 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 DHX38Q92620 1227 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 FAM213AQ9BRX8 229 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 SYT11Q9BT88 431 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 GPR88Q9GZN0 384 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 HAPLN2Q9GZV7 340 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 DPH5Q9H2P9 285 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 RXFP1Q9HBX9 757 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 PCDH18Q9HCL0 1135 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 SEPT11Q9NVA2 429 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 SPATA7Q9P0W8 599 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 APEX2Q9UBZ4 518 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 DAAM1Q9Y4D1 1078 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 A0A0B4J269 797 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 PQBP1O60828 265 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 MMP13P45452 471 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 KBTBD12Q3ZCT8 623 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 ZNF568Q3ZCX4 644 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 SLC39A5Q6ZMH5 540 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 TMC3Q7Z5M5 1100 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 CROCCP2Q86T23 111 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 ZNF653Q96CK0 615 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 NAP1L3Q99457 506 aaPredicted RBP13.73□□□□□ -0.21
FOXN3-219ENST00000615335 OCEL1Q9H607 264 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 MROH7Q68CQ1 1323 aa13.73□□□□□ -0.21
FOXN3-219ENST00000615335 IDO1P14902 403 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 ACOT2P49753 483 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 PSMD7P51665 324 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 POU5F1Q01860 360 aaKnown RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 DHX9Q08211 1270 aaKnown RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■■■□ 19.3
FOXN3-219ENST00000615335 PPP2R5EQ16537 467 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 LONP2Q86WA8 852 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 FAM126BQ8IXS8 530 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 KIF2BQ8N4N8 673 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 ANKLE1Q8NAG6 615 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 SLC35B4Q969S0 331 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 HAPLN3Q96S86 360 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 NKX1-2Q9UD57 310 aaPredicted RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 KIAA0391O15091 583 aaKnown RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 EXTL3O43909 919 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 PEX11AO75192 247 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 LDHAP00338 332 aaKnown RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 CBX3Q13185 183 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 LSAMPQ13449 338 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 KCTD19Q17RG1 926 aaPredicted RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 SEZ6Q53EL9 994 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 WASHC2DQ5SRD0 308 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 ZNF618Q5T7W0 954 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 DCAF12L1Q5VU92 463 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 EEF1DP3Q658K8 133 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 AGGF1Q8N302 714 aaeCLIP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 ARHGEF26Q96DR7 871 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 PAWRQ96IZ0 340 aaKnown RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 TRIM51Q9BSJ1 452 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 THAP2Q9H0W7 228 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 PTPRHQ9HD43 1115 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 INTS9Q9NV88 658 aaKnown RBP13.72□□□□□ -0.21
FOXN3-219ENST00000615335 TUBGCP4Q9UGJ1 667 aa13.72□□□□□ -0.21
FOXN3-219ENST00000615335 ANKRD62A6NC57 917 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 NVLO15381 856 aaKnown RBP13.71□□□□□ -0.21
FOXN3-219ENST00000615335 CKBP12277 381 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 KRT13P13646 458 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 PROZP22891 400 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 SERPINB4P48594 390 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 CACNA2D1P54289 1103 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 MCL1Q07820 350 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 MGAT3Q09327 533 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 BFSP1Q12934 665 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 NFX1Q12986 1120 aaKnown RBP13.71□□□□□ -0.21
FOXN3-219ENST00000615335 TRIM71Q2Q1W2 868 aaKnown RBP13.71□□□□□ -0.21
FOXN3-219ENST00000615335 RASIP1Q5U651 963 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 INTS8Q75QN2 995 aaKnown RBP13.71□□□□□ -0.21
FOXN3-219ENST00000615335 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms