RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 SIX5Q8N196 739 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 SCAMP5Q8TAC9 235 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 NT5C1BQ96P26 610 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 TRPV4Q9HBA0 871 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
CBWD3-211ENST00000615061 SAMSN1Q9NSI8 373 aaKnown RBP17.74■□□□□ 0.43
CBWD3-211ENST00000615061 RAPGEFL1Q9UHV5 662 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 TICRRQ7Z2Z1 1910 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 ATP8B3O60423 1300 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 MYO16Q9Y6X6 1858 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 CETN1Q12798 172 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 RRAGAQ7L523 313 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 CMTM8Q8IZV2 173 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 PPM1KQ8N3J5 372 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 UBR7Q8N806 425 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 EHBP1Q8NDI1 1231 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 MRPS31Q92665 395 aaKnown RBP17.74■□□□□ 0.43
CBWD3-211ENST00000615061 JAKMIP2Q96AA8 810 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 HEXIM2Q96MH2 286 aaKnown RBP17.74■□□□□ 0.43
CBWD3-211ENST00000615061 SLC22A12Q96S37 553 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 CYP2S1Q96SQ9 504 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 HNRNPABQ99729 332 aaKnown RBP17.74■□□□□ 0.43
CBWD3-211ENST00000615061 TTLL2Q9BWV7 592 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 THAP9Q9H5L6 903 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 SLC2A4RGQ9NR83 387 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 CCL26Q9Y258 94 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 C2orf78A6NCI8 922 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 TNFRSF10BO14763 440 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 MTIF2P46199 727 aaKnown RBP17.73■□□□□ 0.43
CBWD3-211ENST00000615061 SLC5A3P53794 718 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 SASS6Q6UVJ0 657 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 CLEC20AQ6ZU45 233 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 BMP8AQ7Z5Y6 402 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 TMEM176AQ96HP8 235 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 CEP295NLQ96MC4 621 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 INTS2Q9H0H0 1204 aaKnown RBP17.73■□□□□ 0.43
CBWD3-211ENST00000615061 CSNK1G1Q9HCP0 422 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 TRPC7Q9HCX4 862 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 GCNT4Q9P109 453 aa17.73■□□□□ 0.43
CBWD3-211ENST00000615061 FAM200BP0CF97 657 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 PSMC3P17980 439 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 APBA1Q02410 837 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 TAF10Q12962 218 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 PHLDB3Q6NSJ2 640 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 MON1AQ86VX9 555 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 NUP93Q8N1F7 819 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 WNT16Q9UBV4 365 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 NFE2L3Q9Y4A8 694 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 DMDP11532 3685 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 MYO15AQ9UKN7 3530 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 KMT2EQ8IZD2 1858 aa17.72■□□□□ 0.43
CBWD3-211ENST00000615061 KIF26AQ9ULI4 1882 aaPredicted RBP17.72■□□□□ 0.43
CBWD3-211ENST00000615061 NPR3P17342 541 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 ACO1P21399 889 aaKnown RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 TBXAS1P24557 533 aaPredicted RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 GDI1P31150 447 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 AVPR1AP37288 418 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 GPRIN1Q7Z2K8 1008 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 MFSD6LQ8IWD5 586 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 FBXL6Q8N531 539 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 TTC39CQ8N584 583 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 RIN3Q8TB24 985 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 USP13Q92995 863 aaPredicted RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 KREMEN1Q96MU8 473 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 TRMT61BQ9BVS5 477 aaKnown RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 VPS13AQ96RL7 3174 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 HELZP42694 1942 aaKnown RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 CALCAP01258 141 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 COL4A2P08572 1712 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 TRIM21P19474 475 aaKnown RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 SLC9A1P19634 815 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 VCPP55072 806 aaKnown RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 GJB7Q6PEY0 223 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 TMEM270Q6UE05 265 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 ARL14EPQ8N8R7 260 aaPredicted RBP17.71■□□□□ 0.43
CBWD3-211ENST00000615061 FLCNQ8NFG4 579 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 ZFYVE19Q96K21 471 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 BRD9Q9H8M2 597 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 ARHGEF3Q9NR81 526 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 TRPM5Q9NZQ8 1165 aa17.71■□□□□ 0.43
CBWD3-211ENST00000615061 ZNF840PA6NDX5 716 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 HHLA1C9JL84 531 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 RNF225M0QZC1 329 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-211ENST00000615061 DPYSL4O14531 572 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 ABL1P00519 1130 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 DDX6P26196 483 aaKnown RBP eCLIP17.7■□□□□ 0.42
CBWD3-211ENST00000615061 YWHAQP27348 245 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 WEE1P30291 646 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 PGFP49763 221 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 STX1AQ16623 288 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 MAN2A1Q16706 1144 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 CT47A1Q5JQC4 288 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-211ENST00000615061 MIIPQ5JXC2 388 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 CWF19L1Q69YN2 538 aaKnown RBP17.7■□□□□ 0.42
CBWD3-211ENST00000615061 ENOX1Q8TC92 643 aaKnown RBP17.7■□□□□ 0.42
CBWD3-211ENST00000615061 DEPDC1BQ8WUY9 529 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 FBXO32Q969P5 355 aa17.7■□□□□ 0.42
CBWD3-211ENST00000615061 MFSD1Q9H3U5 465 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms