RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SETSIPP0DME0 302 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 BRD2P25440 801 aaKnown RBP14.03□□□□□ -0.16
MDC1-209ENST00000613547 GABRR2P28476 465 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 STAT1P42224 750 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 BST2Q10589 180 aaKnown RBP14.03□□□□□ -0.16
MDC1-209ENST00000613547 NR1I3Q14994 352 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 ARHGAP15Q53QZ3 475 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 DPY19L2P1Q6NXN4 242 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 LCLAT1Q6UWP7 414 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 CLEC20AQ6ZU45 233 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 FAM71AQ8IYT1 594 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 FEZF2Q8TBJ5 459 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 IQCDQ96DY2 449 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 MYRFLQ96LU7 910 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 SLITRK1Q96PX8 696 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 KCNK16Q96T55 309 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 SMOQ99835 787 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 ATXN3LQ9H3M9 355 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 NLRC4Q9NPP4 1024 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 COMMD8Q9NX08 183 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 IFNKQ9P0W0 207 aa14.03□□□□□ -0.16
MDC1-209ENST00000613547 F8VZ95 297 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 CYP26A1O43174 497 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 HMGA1P17096 107 aaKnown RBP14.02□□□□□ -0.17
MDC1-209ENST00000613547 SLC5A3P53794 718 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 MTMR3Q13615 1198 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 MEA1Q16626 185 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 PRSS36Q5K4E3 855 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 TMC8Q8IU68 726 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 PDZD8Q8NEN9 1154 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 ITFG1Q8TB96 612 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 TFAP2BQ92481 460 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 MRPS31Q92665 395 aaKnown RBP14.02□□□□□ -0.17
MDC1-209ENST00000613547 FGF13Q92913 245 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 UBXN6Q9BZV1 441 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 GPR88Q9GZN0 384 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 FBXO44Q9H4M3 255 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 SLITRK6Q9H5Y7 841 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 ZNF334Q9HCZ1 680 aaPredicted RBP14.02□□□□□ -0.17
MDC1-209ENST00000613547 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 ZMYM5Q9UJ78 669 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 AJAP1Q9UKB5 411 aaPredicted RBP14.02□□□□□ -0.17
MDC1-209ENST00000613547 CDH7Q9ULB5 785 aa14.02□□□□□ -0.17
MDC1-209ENST00000613547 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.02□□□□□ -0.17
MDC1-209ENST00000613547 A0A1W2PRU2 124 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 M0QYV0 167 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 XPO1O14980 1071 aaKnown RBP14.01□□□□□ -0.17
MDC1-209ENST00000613547 EPHB6O15197 1021 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 CCDC172P0C7W6 258 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 SP100P23497 879 aaPredicted RBP14.01□□□□□ -0.17
MDC1-209ENST00000613547 YWHAQP27348 245 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 KRT9P35527 623 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 PPP3CCP48454 512 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 PDE6CP51160 858 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 ZP2Q05996 745 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 PDE4CQ08493 712 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 IFRD2Q12894 506 aaPredicted RBP14.01□□□□□ -0.17
MDC1-209ENST00000613547 SLC5A9Q2M3M2 681 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 TTC30AQ86WT1 665 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 STKLD1Q8NE28 680 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 ING5Q8WYH8 240 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 NUP58Q9BVL2 599 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 LRRC3Q9BY71 257 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 PDCL3Q9H2J4 239 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 GDE1Q9NZC3 331 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 TRPM5Q9NZQ8 1165 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 MYO6Q9UM54 1294 aa14.01□□□□□ -0.17
MDC1-209ENST00000613547 MTCL1Q9Y4B5 1905 aaKnown RBP14□□□□□ -0.17
MDC1-209ENST00000613547 TNFRSF10BO14763 440 aa14□□□□□ -0.17
MDC1-209ENST00000613547 BEST1O76090 585 aa14□□□□□ -0.17
MDC1-209ENST00000613547 PNMA6AP0CW24 399 aaPredicted RBP14□□□□□ -0.17
MDC1-209ENST00000613547 LAMP2P13473 410 aa14□□□□□ -0.17
MDC1-209ENST00000613547 CEBPBP17676 345 aa14□□□□□ -0.17
MDC1-209ENST00000613547 DDX6P26196 483 aaKnown RBP eCLIP14□□□□□ -0.17
MDC1-209ENST00000613547 SSTR3P32745 418 aaPredicted RBP14□□□□□ -0.17
MDC1-209ENST00000613547 SOX5P35711 763 aa14□□□□□ -0.17
MDC1-209ENST00000613547 CCR2P41597 374 aa14□□□□□ -0.17
MDC1-209ENST00000613547 FIGNQ5HY92 759 aa14□□□□□ -0.17
MDC1-209ENST00000613547 GAREM2Q75VX8 874 aa14□□□□□ -0.17
MDC1-209ENST00000613547 PIGZQ86VD9 579 aa14□□□□□ -0.17
MDC1-209ENST00000613547 NPAS3Q8IXF0 933 aa14□□□□□ -0.17
MDC1-209ENST00000613547 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
MDC1-209ENST00000613547 ZMIZ2Q8NF64 920 aa14□□□□□ -0.17
MDC1-209ENST00000613547 ZNF397Q8NF99 534 aaPredicted RBP14□□□□□ -0.17
MDC1-209ENST00000613547 SHKBP1Q8TBC3 707 aa14□□□□□ -0.17
MDC1-209ENST00000613547 UBA3Q8TBC4 463 aa14□□□□□ -0.17
MDC1-209ENST00000613547 ZNF606Q8WXB4 792 aa14□□□□□ -0.17
MDC1-209ENST00000613547 OVCA2Q8WZ82 227 aa14□□□□□ -0.17
MDC1-209ENST00000613547 FBXO32Q969P5 355 aa14□□□□□ -0.17
MDC1-209ENST00000613547 TCEAL4Q96EI5 215 aa14□□□□□ -0.17
MDC1-209ENST00000613547 MYADMQ96S97 322 aa14□□□□□ -0.17
MDC1-209ENST00000613547 EDEM3Q9BZQ6 932 aa14□□□□□ -0.17
MDC1-209ENST00000613547 XPO4Q9C0E2 1151 aaKnown RBP14□□□□□ -0.17
MDC1-209ENST00000613547 IL21Q9HBE4 155 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms