RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 STX3Q13277 289 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 TTC39BQ5VTQ0 682 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 ZNF75CPQ92670 426 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 SPDL1Q96EA4 605 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 CPB2Q96IY4 423 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 FDXACB1Q9BRP7 624 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 GCOM2Q9BZD3 368 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 MYLK2Q9H1R3 596 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 DPP3Q9NY33 737 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 hCG_1818297A0A087WSY0 165 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 CBX6O95503 412 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 HSPA4LO95757 839 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 KDELR1P24390 212 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 XRCC4Q13426 336 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 PRPSAP1Q14558 356 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 ZNF268Q14587 947 aaPredicted RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 LACTB2Q53H82 288 aaPredicted RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 FAM172AQ8WUF8 416 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 E2F7Q96AV8 911 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 NSL1Q96IY1 281 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 CLMNQ96JQ2 1002 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 AGAP3Q96P47 875 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 OSBPL1AQ9BXW6 950 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 APOBEC3GQ9HC16 384 aaKnown RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 ZFATQ9P243 1243 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 ADGRA3Q8IWK6 1321 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 NHSL1Q5SYE7 1610 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 C5orf60A6NFR6 353 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 B2RBV5 119 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 VTNP04004 478 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 ABHD2P08910 425 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 POU5F1Q01860 360 aaKnown RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 CHI3L2Q15782 390 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 AMHR2Q16671 573 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 CEP120Q8N960 986 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 GABPB2Q8TAK5 448 aaPredicted RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 SEC14L1Q92503 715 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 PGBD4Q96DM1 585 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 STAP1Q9ULZ2 295 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 ARAP2Q8WZ64 1704 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 MYPNQ86TC9 1320 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 SIGLEC16A6NMB1 481 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 KBTBD13C9JR72 458 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 CYP1A1P04798 512 aaPredicted RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 BGNP21810 368 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 RPL22P35268 128 aaKnown RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 GLRA4Q5JXX5 417 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 MAP3K21Q5TCX8 1036 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 CAPRIN2Q6IMN6 1127 aaKnown RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 TRABD2AQ86V40 505 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 AGAP11Q8TF27 550 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 WNK4Q96J92 1243 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 BFARQ9NZS9 450 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 NOD1Q9Y239 953 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 SPDYE16A6NNV3 312 aaPredicted RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 MICAL2O94851 1124 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 MX2P20592 715 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 NDST1P52848 882 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 C1orf220Q5T0J3 134 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 SLC39A4Q6P5W5 647 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 SLC26A11Q86WA9 606 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 AFAP1L2Q8N4X5 818 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 FRMD8Q9BZ67 464 aaPredicted RBP9.05□□□□□ -0.96
LIG4-204ENST00000611712 YIPF3Q9GZM5 350 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 CYP4F11Q9HBI6 524 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 LRRC4CQ9HCJ2 640 aa9.05□□□□□ -0.96
LIG4-204ENST00000611712 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.05□□□□□ -0.96
LIG4-204ENST00000611712 A0A1W2PPM1 405 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 LACTBL1A8MY62 500 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 H3BRJ5 948 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 APOC4-APOC2K7ER74 178 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 TM9SF1O15321 606 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 APOC2P02655 101 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 ITGAVP06756 1048 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 GJB1P08034 283 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 NCALDP61601 193 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 ITKQ08881 620 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 BMPR2Q13873 1038 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 FASTKD3Q14CZ7 662 aaKnown RBP9.04□□□□□ -0.96
LIG4-204ENST00000611712 PREPLQ4J6C6 727 aaPredicted RBP9.04□□□□□ -0.96
LIG4-204ENST00000611712 EFHC2Q5JST6 749 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
LIG4-204ENST00000611712 FASTKD5Q7L8L6 764 aaKnown RBP9.04□□□□□ -0.96
LIG4-204ENST00000611712 FBXL18Q96ME1 805 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 CYP3A43Q9HB55 503 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 SLC24A3Q9HC58 644 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 BATF3Q9NR55 127 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 TSPAN16Q9UKR8 245 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 ALOX15BO15296 676 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 MAFO75444 373 aaPredicted RBP9.04□□□□□ -0.96
LIG4-204ENST00000611712 CFHP08603 1231 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 MYL2P10916 166 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 INSRRP14616 1297 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 GRM1Q13255 1194 aa9.04□□□□□ -0.96
LIG4-204ENST00000611712 DPYSL3Q14195 570 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms