RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CCDC130P13994 396 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 RTP1P59025 263 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 DRP2Q13474 957 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 NAA25Q14CX7 972 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 ZBTB41Q5SVQ8 909 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 C11orf63Q6NUN7 778 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 SLFN11Q7Z7L1 901 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 TBC1D1Q86TI0 1168 aaPredicted RBP7.59□□□□□ -1.2
CSDE1-218ENST00000610726 NLRP14Q86W24 1093 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 SLC25A41Q8N5S1 370 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 SENP8Q96LD8 212 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 LMCD1Q9NZU5 365 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 BAZ2AQ9UIF9 1905 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 ESRRAP11474 423 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CASP2P42575 452 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 HIRAP54198 1017 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 STX1BP61266 288 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 EFEMP1Q12805 493 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 NOGQ13253 232 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 RBBP5Q15291 538 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 FASTKD1Q53R41 847 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 DAB2IPQ5VWQ8 1189 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 DENND1BQ6P3S1 775 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 NDUFAF2Q8N183 169 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 EFHBQ8N7U6 833 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 LPPQ93052 612 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CHMP6Q96FZ7 201 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 C12orf42Q96LP6 360 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 APBA2Q99767 749 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 HSD3B7Q9H2F3 369 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TSPYL2Q9H2G4 693 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 GGT7Q9UJ14 662 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 NUDT5Q9UKK9 219 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 REXO2Q9Y3B8 237 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CNTNAP2Q9UHC6 1331 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 A0A0B4J269 797 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 A0A0G2JLL6 359 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 MAPK13O15264 365 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CFLARO15519 480 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TLR2O60603 784 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 AGTP01019 485 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 RARAP10276 462 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CHN1P15882 459 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 AXLP30530 894 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 FMO1Q01740 532 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 WSCD1Q658N2 575 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TAS2R42Q7RTR8 314 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PRRT2Q7Z6L0 340 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TADA2BQ86TJ2 420 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PPIL6Q8IXY8 311 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PDCD7Q8N8D1 485 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TFB1MQ8WVM0 346 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 SCG3Q8WXD2 468 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PRMT1Q99873 361 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 APOL2Q9BQE5 337 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 LBHD1Q9BQE6 289 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 MUC3BQ9H195 1237 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 MTIF3Q9H2K0 278 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 SUDS3Q9H7L9 328 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CATSPERBQ9H7T0 1116 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 XPNPEP1Q9NQW7 623 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PCDHGC5Q9Y5F6 944 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CNTNAP1P78357 1384 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TBKBP1A7MCY6 615 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PHF20L1A8MW92 1017 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TCP11X1B4DZS4 312 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 MDH1P40925 334 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 HARS2P49590 506 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 SEC24CP53992 1094 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF200P98182 395 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF268Q14587 947 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 ATP13A4Q4VNC1 1196 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 FAM171A1Q5VUB5 890 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 STKLD1Q8NE28 680 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 ZSWIM2Q8NEG5 633 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PPTC7Q8NI37 304 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 TTC8Q8TAM2 541 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 MDM1Q8TC05 714 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF669Q96BR6 464 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 DDX27Q96GQ7 796 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 VCPIP1Q96JH7 1222 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 CEP41Q9BYV8 373 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 PABPC3Q9H361 631 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 DHX33Q9H6R0 707 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 GTSE1Q9NYZ3 720 aa7.58□□□□□ -1.2
CSDE1-218ENST00000610726 LSM7Q9UK45 103 aaKnown RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-218ENST00000610726 GOLGA4Q13439 2230 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 DOT1LQ8TEK3 1739 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 RPLP2P05387 115 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PAEPP09466 180 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 SETSIPP0DME0 302 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PPARGP37231 505 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 HSPA9P38646 679 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 YWHAZP63104 245 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MCL1Q07820 350 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 NFE2Q16621 373 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ZCWPW2Q504Y3 356 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms