RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 ZNF394Q53GI3 561 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 ARHGAP15Q53QZ3 475 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 WDR44Q5JSH3 913 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 DENND5BQ6ZUT9 1274 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 MFSD6LQ8IWD5 586 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 SIX5Q8N196 739 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 MAB21L3Q8N8X9 362 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 SLC4A11Q8NBS3 891 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 KAT5Q92993 513 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 CNOT6LQ96LI5 555 aaKnown RBP13.54□□□□□ -0.24
CD9-212ENST00000610354 CEP295NLQ96MC4 621 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 HNRNPABQ99729 332 aaKnown RBP13.54□□□□□ -0.24
CD9-212ENST00000610354 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 CCL26Q9Y258 94 aa13.54□□□□□ -0.24
CD9-212ENST00000610354 F5P12259 2224 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 HELZP42694 1942 aaKnown RBP13.53□□□□□ -0.24
CD9-212ENST00000610354 HHLA1C9JL84 531 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 PI15O43692 258 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 AP1G2O75843 785 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 ADORA2BP29275 332 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 CUL2Q13617 745 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 PPP1R26Q5T8A7 1209 aaPredicted RBP13.53□□□□□ -0.24
CD9-212ENST00000610354 MON1AQ86VX9 555 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 ARHGEF19Q8IW93 802 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 CMTM8Q8IZV2 173 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 TMEM105Q8N8V8 129 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 EHBP1Q8NDI1 1231 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 SCAMP5Q8TAC9 235 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 CYFIP2Q96F07 1278 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 CYP2S1Q96SQ9 504 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 CSNK1G1Q9HCP0 422 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 KRT82Q9NSB4 513 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 IL37Q9NZH6 218 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 GCNT4Q9P109 453 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
CD9-212ENST00000610354 FBXL21Q9UKT6 434 aa13.53□□□□□ -0.24
CD9-212ENST00000610354 C2orf78A6NCI8 922 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 ARNTLO00327 626 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 P4HA2O15460 535 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 AFPP02771 609 aaKnown RBP13.52□□□□□ -0.25
CD9-212ENST00000610354 PSMC3P17980 439 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 ACO1P21399 889 aaKnown RBP13.52□□□□□ -0.25
CD9-212ENST00000610354 ANXA13P27216 316 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 ERCC5P28715 1186 aaPredicted RBP13.52□□□□□ -0.25
CD9-212ENST00000610354 AVPR2P30518 371 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 GDI1P31150 447 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 PGFP49763 221 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 SLC44A4Q53GD3 710 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 CLEC20AQ6ZU45 233 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 GPRIN1Q7Z2K8 1008 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 DEPDC1BQ8WUY9 529 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 MRPS31Q92665 395 aaKnown RBP13.52□□□□□ -0.25
CD9-212ENST00000610354 USP13Q92995 863 aaPredicted RBP13.52□□□□□ -0.25
CD9-212ENST00000610354 SMARCD1Q96GM5 515 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 GCNAQ96QF7 691 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
CD9-212ENST00000610354 DMAP1Q9NPF5 467 aaPredicted RBP13.52□□□□□ -0.25
CD9-212ENST00000610354 ARHGEF3Q9NR81 526 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.52□□□□□ -0.25
CD9-212ENST00000610354 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.25
CD9-212ENST00000610354 MYO16Q9Y6X6 1858 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 RNF225M0QZC1 329 aaPredicted RBP13.51□□□□□ -0.25
CD9-212ENST00000610354 FGFR1OPO95684 399 aaKnown RBP13.51□□□□□ -0.25
CD9-212ENST00000610354 CALCAP01258 141 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 DDX6P26196 483 aaKnown RBP eCLIP13.51□□□□□ -0.25
CD9-212ENST00000610354 MAP3K7CLP57077 242 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 STARD6P59095 220 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 ZXDBP98169 803 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 FCHO2Q0JRZ9 810 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 TAF10Q12962 218 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 NUP93Q8N1F7 819 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 ARL14EPQ8N8R7 260 aaPredicted RBP13.51□□□□□ -0.25
CD9-212ENST00000610354 FLCNQ8NFG4 579 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 ZFYVE19Q96K21 471 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 HEXIM2Q96MH2 286 aaKnown RBP13.51□□□□□ -0.25
CD9-212ENST00000610354 KREMEN1Q96MU8 473 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
CD9-212ENST00000610354 INTS2Q9H0H0 1204 aaKnown RBP13.51□□□□□ -0.25
CD9-212ENST00000610354 HEBP1Q9NRV9 189 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 SAMSN1Q9NSI8 373 aaKnown RBP13.51□□□□□ -0.25
CD9-212ENST00000610354 OBP2AQ9NY56 170 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 TMEM63CQ9P1W3 806 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 ATP8B3O60423 1300 aa13.51□□□□□ -0.25
CD9-212ENST00000610354 FAM92AA1XBS5 289 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 FAM200BP0CF97 657 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 YWHAQP27348 245 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 SLC5A3P53794 718 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 APBA1Q02410 837 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
CD9-212ENST00000610354 MLF2Q15773 248 aaPredicted RBP13.5□□□□□ -0.25
CD9-212ENST00000610354 HSP90AA4PQ58FG1 418 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 ARHGAP17Q68EM7 881 aa13.5□□□□□ -0.25
CD9-212ENST00000610354 ASTLQ6HA08 431 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms