RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MAGED2Q9UNF1 606 aaPredicted RBP14.25□□□□□ -0.13
CTSA-213ENST00000606782 TRAF3IP3Q9Y228 551 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 NME7Q9Y5B8 376 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 PTPRDP23468 1912 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 ZNF638Q14966 1978 aaKnown RBP14.24□□□□□ -0.13
CTSA-213ENST00000606782 ANAPC1Q9H1A4 1944 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 EXOC3O60645 756 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 PDGFRBP09619 1106 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 TCF3P15923 654 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 PFKLP17858 780 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 GNL1P36915 607 aaPredicted RBP14.24□□□□□ -0.13
CTSA-213ENST00000606782 CXCL12P48061 93 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 AP3M2P53677 418 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 FOXK2Q01167 660 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 RUNX3Q13761 415 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 NFIL3Q16649 462 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 WDR72Q3MJ13 1102 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 CT47A1Q5JQC4 288 aaPredicted RBP14.24□□□□□ -0.13
CTSA-213ENST00000606782 SASS6Q6UVJ0 657 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 STKLD1Q8NE28 680 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 RIN3Q8TB24 985 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 PLEKHO2Q8TD55 490 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 PARD3BQ8TEW8 1205 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 MYLPFQ96A32 169 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 CHFRQ96EP1 664 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 MMS19Q96T76 1030 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 MRPL45Q9BRJ2 306 aaKnown RBP14.24□□□□□ -0.13
CTSA-213ENST00000606782 TTLL2Q9BWV7 592 aa14.24□□□□□ -0.13
CTSA-213ENST00000606782 OTOL1A6NHN0 477 aaPredicted RBP14.23□□□□□ -0.13
CTSA-213ENST00000606782 TRDMT1O14717 391 aaKnown RBP14.23□□□□□ -0.13
CTSA-213ENST00000606782 MYL6P60660 151 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 PSMC1P62191 440 aaKnown RBP14.23□□□□□ -0.13
CTSA-213ENST00000606782 SATB1Q01826 763 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 STIM1Q13586 685 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 PON2Q15165 354 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 PDGFRLQ15198 375 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 ZCWPW2Q504Y3 356 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 TMEM196Q5HYL7 178 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 FOXR2Q6PJQ5 311 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 SCN4BQ8IWT1 228 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 KIAA1958Q8N8K9 716 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 PCED1BQ96HM7 432 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 C8orf48Q96LL4 319 aa14.23□□□□□ -0.13
CTSA-213ENST00000606782 RBM12Q9NTZ6 932 aaKnown RBP14.23□□□□□ -0.13
CTSA-213ENST00000606782 TRAV19A0A0A6YYK7 116 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 K7ESF4 209 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 PSMA7O14818 248 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 TRIM66O15016 1216 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 CALUO43852 315 aaPredicted RBP14.22□□□□□ -0.13
CTSA-213ENST00000606782 C4BPAP04003 597 aaKnown RBP14.22□□□□□ -0.13
CTSA-213ENST00000606782 USP17L7P0C7H9 530 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 PTPN1P18031 435 aaKnown RBP14.22□□□□□ -0.13
CTSA-213ENST00000606782 BDNFP23560 247 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 PPP3CCP48454 512 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 PMS1P54277 932 aaKnown RBP14.22□□□□□ -0.13
CTSA-213ENST00000606782 NOP14P78316 857 aaKnown RBP14.22□□□□□ -0.13
CTSA-213ENST00000606782 USP4Q13107 963 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 TRPC3Q13507 836 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 ZNF77Q15935 545 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 ZSCAN23Q3MJ62 389 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 ANKRD40Q6AI12 368 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 DENND5BQ6ZUT9 1274 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 DCLK2Q8N568 766 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 GPR161Q8N6U8 529 aaKnown RBP14.22□□□□□ -0.13
CTSA-213ENST00000606782 TTC8Q8TAM2 541 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 SLC22A12Q96S37 553 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 CYP2S1Q96SQ9 504 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 SNX25Q9H3E2 840 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 EBF3Q9H4W6 596 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 EHD2Q9NZN4 543 aa14.22□□□□□ -0.13
CTSA-213ENST00000606782 SMG5Q9UPR3 1016 aaKnown RBP14.22□□□□□ -0.13
CTSA-213ENST00000606782 LRRIQ3A6PVS8 624 aaPredicted RBP14.21□□□□□ -0.13
CTSA-213ENST00000606782 ERCC5P28715 1186 aaPredicted RBP14.21□□□□□ -0.13
CTSA-213ENST00000606782 GRIK1P39086 918 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 ID4P47928 161 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 CASP4P49662 377 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 PDE6CP51160 858 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 MCCD1P59942 119 aaPredicted RBP14.21□□□□□ -0.13
CTSA-213ENST00000606782 TNNC1P63316 161 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 AMPD2Q01433 879 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 TYRO3Q06418 890 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 MTF1Q14872 753 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 DPCR1Q3MIW9 517 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 MDH1BQ5I0G3 518 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 TDRD10Q5VZ19 366 aaKnown RBP14.21□□□□□ -0.13
CTSA-213ENST00000606782 FSTL4Q6MZW2 842 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 CC2D1AQ6P1N0 951 aaPredicted RBP14.21□□□□□ -0.13
CTSA-213ENST00000606782 Q6ZS52 159 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 ERMP1Q7Z2K6 904 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 KIAA2013Q8IYS2 634 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 OR6B3Q8NGW1 331 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 TMC2Q8TDI7 906 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 OSCP1Q8WVF1 389 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 NELFBQ8WX92 580 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 MED15Q96RN5 788 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 ANO10Q9NW15 660 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 ARHGAP26Q9UNA1 814 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 FRYLO94915 3013 aa14.21□□□□□ -0.13
CTSA-213ENST00000606782 SYCE3A1L190 88 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms