RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PDZD4Q76G19 769 aaPredicted RBP6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 RIC3Q7Z5B4 369 aa6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 PHLDB2Q86SQ0 1253 aa6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 CREG2Q8IUH2 290 aa6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 RHOT2Q8IXI1 618 aa6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 TRIM47Q96LD4 638 aa6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 FAM83CQ9BQN1 747 aa6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 PRKD2Q9BZL6 878 aa6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 EIF3AQ14152 1382 aaKnown RBP6.1□□□□□ -1.43
COL4A3BP-207ENST00000604926 FAM47E-STBD1D6RA91 191 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 LINC01387J3KSC0 135 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 AXIN1O15169 862 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 SHOXO15266 292 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 HNRNPRO43390 633 aaKnown RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 FMO6PO60774 539 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 PHKG2P15735 406 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 EIF4A3P38919 411 aaKnown RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 GRK6P43250 576 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 PTPN9P43378 593 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 USP14P54578 494 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 AK2P54819 239 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 POLE2P56282 527 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 C2orf54Q08AI8 447 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 BLMHQ13867 455 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 USPL1Q5W0Q7 1092 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 KCTD16Q68DU8 428 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 ERICH5Q6P6B1 374 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 SLC22A25Q6T423 547 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 COMTD1Q86VU5 262 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 SGMS1Q86VZ5 419 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 CNTROBQ8N137 903 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TCAIMQ8N3R3 496 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 DNAAF3Q8N9W5 541 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TRIM63Q969Q1 353 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TRIM43Q96BQ3 446 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 MYD88Q99836 296 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 CARD9Q9H257 536 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TRPC7Q9HCX4 862 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 UCKL1Q9NWZ5 548 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TAS2R7Q9NYW3 318 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 MAPRE3Q9UPY8 281 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 MSRB2Q9Y3D2 182 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 FAM169AQ9Y6X4 670 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 MAP2P11137 1827 aaKnown RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 ZSCAN5BA6NJL1 495 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TARM1B6A8C7 271 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 SSX5O60225 188 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 RFPL1O75677 317 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 BMP10O95393 424 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 CHGBP05060 677 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 ITGB3P05106 788 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 FGF4P08620 206 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 KRT7P08729 469 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 HMOX1P09601 288 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 HSD3B1P14060 373 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 HMOX2P30519 316 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 SLC8A1P32418 973 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 ME1P48163 572 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 RNF144AP50876 292 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 KCNJ10P78508 379 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TAP2Q03519 686 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 PTK2Q05397 1052 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 EHHADHQ08426 723 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 AANATQ16613 207 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 MAPK6Q16659 721 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 AOC3Q16853 763 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 AAK1Q2M2I8 961 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 IL23RQ5VWK5 629 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 PAPD4Q6PIY7 484 aaKnown RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TRIM72Q6ZMU5 477 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 CYP4V2Q6ZWL3 525 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 PHC2Q8IXK0 858 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 CCDC36Q8IYA8 594 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 GLB1L3Q8NCI6 653 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 GANCQ8TET4 914 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 FAM216AQ8WUB2 273 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 RILPL2Q969X0 211 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 RMDN1Q96DB5 314 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TTLL2Q9BWV7 592 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 ZCCHC2Q9C0B9 1178 aaKnown RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 DMAP1Q9NPF5 467 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 FAM217BQ9NTX9 383 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TRMT13Q9NUP7 481 aaKnown RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 TBCCD1Q9NVR7 557 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 POLR3BQ9NW08 1133 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 ACTR3BQ9P1U1 418 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 PHLPP2Q6ZVD8 1323 aa6.09□□□□□ -1.43
COL4A3BP-207ENST00000604926 FAM196BA6NMK8 535 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 ERVV-2B6SEH9 535 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 DDX39AO00148 427 aaKnown RBP6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 DDX3YO15523 660 aaKnown RBP6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 PRPSAP2O60256 369 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 CRKLP46109 303 aaKnown RBP6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 AFF3P51826 1226 aaKnown RBP6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 RNF4P78317 190 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 CDK18Q07002 472 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 CDC20Q12834 499 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 CYTH1Q15438 398 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 PPP2R5EQ16537 467 aa6.09□□□□□ -1.44
COL4A3BP-207ENST00000604926 VWA5B1Q5TIE3 1220 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms