RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	HMGB2	P26583	209 aa	Known RBP	5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	CTCF	P49711	727 aa	Predicted RBP	5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	ERVK-21	P61565	698 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	MC2R	Q01718	297 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	KLF1	Q13351	362 aa	Predicted RBP	5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	BMPR2	Q13873	1038 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	SLC9A4	Q6AI14	798 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	CEP85	Q6P2H3	762 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	GADL1	Q6ZQY3	521 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	NEK8	Q86SG6	692 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	PDSS2	Q86YH6	399 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	PPM1N	Q8N819	430 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	POC1B	Q8TC44	478 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	SERTAD4	Q9NUC0	356 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	TBC1D30	Q9Y2I9	924 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	PCDHB1	Q9Y5F3	818 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	CCDC7	Q96M83	1385 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	TRPM1	Q7Z4N2	1603 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	KIAA1210	Q9ULL0	1709 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	BTAF1	O14981	1849 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	TUBGCP6	Q96RT7	1819 aa		5.36	□□□□□ -1.55
FARP1-238	ENST00000602015	WNK3	Q9BYP7	1800 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	PLEKHG2	Q9H7P9	1386 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	VWC2L	B2RUY7	222 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	JTB	O76095	146 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	NXPH3	O95157	252 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	LATS1	O95835	1130 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	CD1A	P06126	327 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	ZFX	P17010	805 aa	Predicted RBP	5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	DRD4	P21917	467 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	ZNF551	Q7Z340	670 aa	Predicted RBP	5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	CAMKK1	Q8N5S9	505 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	NSUN7	Q8NE18	718 aa	Known RBP	5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	TMIE	Q8NEW7	156 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	SCAMP4	Q969E2	229 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	RFK	Q969G6	155 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	FKBP10	Q96AY3	582 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	ZBTB9	Q96C00	473 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	TPSD1	Q9BZJ3	242 aa		5.35	□□□□□ -1.55
FARP1-238	ENST00000602015	SLIT3	O75094	1523 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	ABCC6	O95255	1503 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	POLRMT	O00411	1230 aa	Known RBP	5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	TP73	O15350	636 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	MOSPD3	O75425	235 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	CHEK2	O96017	543 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	EBLN1	P0CF75	366 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	NDUFB7	P17568	137 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	HSD3B2	P26439	372 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	MASP1	P48740	699 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	NDUFV1	P49821	464 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	CLUL1	Q15846	466 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	TEDDM1	Q5T9Z0	273 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	DENND1A	Q8TEH3	1009 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	LRIG1	Q96JA1	1093 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	BRIP1	Q9BX63	1249 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	SIK2	Q9H0K1	926 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	TMX1	Q9H3N1	280 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	GNL3L	Q9NVN8	582 aa	Known RBP	5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	RLIM	Q9NVW2	624 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	SIDT1	Q9NXL6	827 aa	Known RBP	5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	PCDHA13	Q9Y5I0	950 aa		5.34	□□□□□ -1.55
FARP1-238	ENST00000602015	PPIP5K1	Q6PFW1	1433 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	ZNF521	Q96K83	1311 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	FAM163B	P0C2L3	166 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	EPHB2	P29323	1055 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	TMEM119	Q4V9L6	283 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	FLYWCH1	Q4VC44	716 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	ZNF804A	Q7Z570	1209 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	ATRIP	Q8WXE1	791 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	TBC1D5	Q92609	795 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	MRGPRX4	Q96LA9	322 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	ADGRB1	O14514	1584 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	KAT6A	Q92794	2004 aa		5.33	□□□□□ -1.56
FARP1-238	ENST00000602015	NSD2	O96028	1365 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	ITSN1	Q15811	1721 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	CENPF	P49454	3210 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	NDUFS2	O75306	463 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	VEGFA	P15692	232 aa	Predicted RBP	5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	CYP2C19	P33261	490 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	CCT4	P50991	539 aa	Known RBP	5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	ZNF280A	P59817	542 aa	Predicted RBP	5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	TLE1	Q04724	770 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	ANKRD16	Q6P6B7	361 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	KRT26	Q7Z3Y9	468 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	CLPTM1L	Q96KA5	538 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	CDK19	Q9BWU1	502 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	ACTRT3	Q9BYD9	372 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	AMBRA1	Q9C0C7	1298 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	ARHGEF3	Q9NR81	526 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	SLC45A2	Q9UMX9	530 aa		5.32	□□□□□ -1.56
FARP1-238	ENST00000602015	LY75	O60449	1722 aa		5.31	□□□□□ -1.56
FARP1-238	ENST00000602015	CNTNAP1	P78357	1384 aa		5.31	□□□□□ -1.56
FARP1-238	ENST00000602015	PPP6C	O00743	305 aa		5.31	□□□□□ -1.56
FARP1-238	ENST00000602015	CLSTN1	O94985	981 aa		5.31	□□□□□ -1.56
FARP1-238	ENST00000602015	RHO	P08100	348 aa		5.31	□□□□□ -1.56
FARP1-238	ENST00000602015	GNAI3	P08754	354 aa		5.31	□□□□□ -1.56
FARP1-238	ENST00000602015	ITGAL	P20701	1170 aa		5.31	□□□□□ -1.56
FARP1-238	ENST00000602015	CNGA1	P29973	690 aa		5.31	□□□□□ -1.56

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