RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MED10Q9BTT4 135 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ELOVL4Q9GZR5 314 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 LACRTQ9GZZ8 138 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 SDCBP2Q9H190 292 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 PIDD1Q9HB75 910 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 CD207Q9UJ71 328 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 GTF3C4Q9UKN8 822 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 GUCA1BQ9UMX6 200 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 PCDHB4Q9Y5E5 795 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ZNF638Q14966 1978 aaKnown RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 A0A087X0T9 212 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 BTNL10A8MVZ5 291 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 FOXN3O00409 490 aaPredicted RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 TRIM66O15016 1216 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 LINC01565O15544 149 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 LRRN2O75325 713 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 GLP2RO95838 553 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 PAEPP09466 180 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 SPATA31D3P0C874 917 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 FAM228BP0C875 321 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 PNMA6AP0CW24 399 aaPredicted RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 KRT5P13647 590 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 KCNA5P22460 613 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 EPHB3P54753 998 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 SLC8A3P57103 927 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 RPL10AP62906 217 aaKnown RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 DUSP4Q13115 394 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 TUBB2AQ13885 445 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 TAF12Q16514 161 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 CFAP221Q4G0U5 840 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 FAM171BQ6P995 826 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 TMEM270Q6UE05 265 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 VSTM1Q6UX27 236 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 SPATA31D4Q6ZUB0 917 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 ACOT1Q86TX2 421 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 ITIH5Q86UX2 942 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 FAM71AQ8IYT1 594 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 CRYBG2Q8N1P7 616 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 CMASQ8NFW8 434 aaPredicted RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 SECISBP2LQ93073 1101 aaKnown RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 MYLPFQ96A32 169 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 CEP295NLQ96MC4 621 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 HEXIM2Q96MH2 286 aaKnown RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 RIPOR3Q96MK2 946 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 KREMEN1Q96MU8 473 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 TMEM209Q96SK2 561 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 SEPT5Q99719 369 aaPredicted RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 NAPGQ99747 312 aaPredicted RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 ARID3AQ99856 593 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.67□□□□□ -0.7
UPF1-213ENST00000601981 TUBB2BQ9BVA1 445 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 IRX2Q9BZI1 471 aaPredicted RBP10.67□□□□□ -0.7
UPF1-213ENST00000601981 EHD2Q9NZN4 543 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 THEGQ9P2T0 379 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 TRIM10Q9UDY6 481 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 ADAMTS1Q9UHI8 967 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 INTUQ9ULD6 942 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 KIAA1257Q9ULG3 409 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 INSL5Q9Y5Q6 135 aa10.67□□□□□ -0.7
UPF1-213ENST00000601981 GREB1Q4ZG55 1949 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 PATJQ8NI35 1801 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 UQCRHLA0A096LP55 91 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.66□□□□□ -0.7
UPF1-213ENST00000601981 CCDC195A0A1B0GUA6 201 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 MYBPHLA2RUH7 354 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 CTAGE9A4FU28 777 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 TBX10O75333 385 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 ABL1P00519 1130 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 UQCRHP07919 91 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 POU2F2P09086 479 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 CD19P15391 556 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 USP8P40818 1118 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 MTHFRP42898 656 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 MAGEA11P43364 429 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 BPIFB4P59827 614 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 STILQ15468 1287 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 ZNF394Q53GI3 561 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 SGO2Q562F6 1265 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 ATAT1Q5SQI0 421 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 RARS2Q5T160 578 aaKnown RBP10.66□□□□□ -0.7
UPF1-213ENST00000601981 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 RNF10Q8N5U6 811 aaKnown RBP10.66□□□□□ -0.7
UPF1-213ENST00000601981 ATAD1Q8NBU5 361 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 RBBP8NLQ8NC74 664 aaPredicted RBP10.66□□□□□ -0.7
UPF1-213ENST00000601981 VN1R2Q8NFZ6 395 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 SLC30A5Q8TAD4 765 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 OLIG1Q8TAK6 271 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 SMG7Q92540 1137 aaKnown RBP10.66□□□□□ -0.7
UPF1-213ENST00000601981 KAT5Q92993 513 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 SMARCD1Q96GM5 515 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 PCED1BQ96HM7 432 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 ZNF512Q96ME7 567 aaPredicted RBP10.66□□□□□ -0.7
UPF1-213ENST00000601981 NECTIN4Q96NY8 510 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 RHOBTB2Q9BYZ6 727 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 ADAM7Q9H2U9 754 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 DPEP3Q9H4B8 488 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 CRTAC1Q9NQ79 661 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 HESX1Q9UBX0 185 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms