RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ALDH1A3	P47895	512 aa		23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	SMAD4	Q13485	552 aa	Known RBP	23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	STIL	Q15468	1287 aa		23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	E4F1	Q66K89	784 aa	Predicted RBP	23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	VSTM1	Q6UX27	236 aa		23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	SLC47A2	Q86VL8	602 aa		23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	ZNF677	Q86XU0	584 aa		23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	CYFIP2	Q96F07	1278 aa		23.25	■■□□□ 1.31
LTBP4-227	ENST00000600026	GRXCR2	A6NFK2	248 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	MBTPS2	O43462	519 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	XYLB	O75191	536 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	SKIL	P12757	684 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	ADORA2B	P29275	332 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	CACNA2D1	P54289	1103 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	CDK17	Q00537	523 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	MEA1	Q16626	185 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	ARHGAP17	Q68EM7	881 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	CES5A	Q6NT32	575 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	VPS36	Q86VN1	386 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	SCN4B	Q8IWT1	228 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	SMARCD1	Q96GM5	515 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	HNRNPAB	Q99729	332 aa	Known RBP	23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	HAUS4	Q9H6D7	363 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	PIDD1	Q9HB75	910 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	KRT82	Q9NSB4	513 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	TMEM30A	Q9NV96	361 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	USP15	Q9Y4E8	981 aa	Predicted RBP	23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	NOTCH4	Q99466	2003 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	TTC28	Q96AY4	2481 aa		23.24	■■□□□ 1.31
LTBP4-227	ENST00000600026	CALCA	P01258	141 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	EPHB3	P54753	998 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	RPL10A	P62906	217 aa	Known RBP	23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	DDR2	Q16832	855 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	SDHAF4	Q5VUM1	108 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	WDR59	Q6PJI9	974 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	CYP26C1	Q6V0L0	522 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	TMTC1	Q8IUR5	882 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	CCDC112	Q8NEF3	446 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	EPS8L1	Q8TE68	723 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	ZNF606	Q8WXB4	792 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	PDCL3	Q9H2J4	239 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	ACP6	Q9NPH0	428 aa		23.23	■■□□□ 1.31
LTBP4-227	ENST00000600026	TRIM66	O15016	1216 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	AP1G2	O75843	785 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	BRD2	P25440	801 aa	Known RBP	23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	GRIK1	P39086	918 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	HGSNAT	Q68CP4	663 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	NOP9	Q86U38	636 aa	Known RBP	23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	ELMOD1	Q8N336	334 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	GIPC2	Q8TF65	315 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	TFAP2B	Q92481	460 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	SUSD6	Q92537	303 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	RIPOR3	Q96MK2	946 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	BAG1	Q99933	345 aa	Predicted RBP	23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	AGPAT1	Q99943	283 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	HCFC1R1	Q9NWW0	138 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026	OBSL1	O75147	1896 aa		23.22	■■□□□ 1.31
LTBP4-227	ENST00000600026		F8VP50	259 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	FAM200B	P0CF97	657 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	TNFAIP3	P21580	790 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	MTHFR	P42898	656 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	CDR2	Q01850	454 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	VEPH1	Q14D04	833 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	CNGA2	Q16280	664 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	GOLGA7B	Q2TAP0	167 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	ATAT1	Q5SQI0	421 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	TAF3	Q5VWG9	929 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	LRRC8A	Q8IWT6	810 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	STKLD1	Q8NE28	680 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	GPR152	Q8TDT2	470 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	ZNF512	Q96ME7	567 aa	Predicted RBP	23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	ZSWIM1	Q9BR11	485 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	DEF6	Q9H4E7	631 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	DMAP1	Q9NPF5	467 aa	Predicted RBP	23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	DNMT3B	Q9UBC3	853 aa	Known RBP	23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	NOCT	Q9UK39	431 aa	Known RBP	23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	MYO16	Q9Y6X6	1858 aa		23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	ZNF638	Q14966	1978 aa	Known RBP	23.21	■■□□□ 1.31
LTBP4-227	ENST00000600026	SSU72P8	A0A1W2PR75	194 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026		O00370	1275 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	FECH	P22830	423 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	ANXA13	P27216	316 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	NTHL1	P78549	312 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	PTCRA	Q6ISU1	281 aa	Predicted RBP	23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	CLEC20A	Q6ZU45	233 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	GRASP	Q7Z6J2	395 aa	Predicted RBP	23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	ITIH5	Q86UX2	942 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	ZMIZ2	Q8NF64	920 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	SLC20A1	Q8WUM9	679 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	PSMG2	Q969U7	264 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	C8orf48	Q96LL4	319 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	CCDC42	Q96M95	316 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	CHP1	Q99653	195 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	SMO	Q99835	787 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	CORO1B	Q9BR76	489 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	SEPT11	Q9NVA2	429 aa	Known RBP	23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	ARHGAP20	Q9P2F6	1191 aa		23.2	■■□□□ 1.3
LTBP4-227	ENST00000600026	HESX1	Q9UBX0	185 aa		23.2	■■□□□ 1.3

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms