RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 TRUB2O95900 331 aaKnown RBP15.2■□□□□ 0.02
VRK3-217ENST00000599538 CYBAP13498 195 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 PDGFRAP16234 1089 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 SLCO1A2P46721 670 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 ZNF143P52747 638 aaPredicted RBP15.2■□□□□ 0.02
VRK3-217ENST00000599538 MMRN1Q13201 1228 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 SLMAPQ14BN4 828 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 P3H1Q32P28 736 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 NBPF20Q3BBV1 942 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 IZUMO3Q5VZ72 239 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 TWF2Q6IBS0 349 aaKnown RBP15.2■□□□□ 0.02
VRK3-217ENST00000599538 GDF6Q6KF10 455 aaPredicted RBP15.2■□□□□ 0.02
VRK3-217ENST00000599538 OLFML1Q6UWY5 402 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 CLEC4CQ8WTT0 213 aa15.2■□□□□ 0.02
VRK3-217ENST00000599538 PTGESO14684 152 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.02
VRK3-217ENST00000599538 PAPSS1O43252 624 aaPredicted RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 KRT7P08729 469 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 CTSHP09668 335 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 KCNE1P15382 129 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 INHBEP58166 350 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 ATP11AP98196 1134 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 HADHQ16836 314 aaKnown RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 AGBL2Q5U5Z8 902 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 ALLCQ8N6M5 410 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 CCDC89Q8N998 374 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 ACTL9Q8TC94 416 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 TRAIPQ9BWF2 469 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 MIS12Q9H081 205 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 SCN10AQ9Y5Y9 1956 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 RNF8O76064 485 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 GPD1P21695 349 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 ADORA2BP29275 332 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 VCPP55072 806 aaKnown RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 GDF10P55107 478 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 OTUD4Q01804 1114 aaKnown RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 TAZQ16635 292 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 KYNUQ16719 465 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 CCDC14Q49A88 953 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 DRICH1Q6PGQ1 229 aaPredicted RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 B4GALNT4Q76KP1 1039 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 CMASQ8NFW8 434 aaPredicted RBP15.19■□□□□ 0.02
VRK3-217ENST00000599538 SLC35B2Q8TB61 432 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 TLCD1Q96CP7 247 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 SLC4A5Q9BY07 1137 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 SLC12A6Q9UHW9 1150 aa15.19■□□□□ 0.02
VRK3-217ENST00000599538 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
VRK3-217ENST00000599538 FLT3LGP49771 235 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 ARSEP51690 589 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 NRLP54845 237 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 GJA9P57773 515 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 IFI35P80217 286 aaPredicted RBP15.18■□□□□ 0.02
VRK3-217ENST00000599538 PLCB3Q01970 1234 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 HIBCHQ6NVY1 386 aaPredicted RBP15.18■□□□□ 0.02
VRK3-217ENST00000599538 TMEM110Q86TL2 294 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 NME8Q8N427 588 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 KCTD6Q8NC69 237 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 CNPY3Q9BT09 278 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 ADAM33Q9BZ11 813 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 FAM124BQ9H5Z6 455 aaPredicted RBP15.18■□□□□ 0.02
VRK3-217ENST00000599538 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 TLL2Q9Y6L7 1015 aa15.18■□□□□ 0.02
VRK3-217ENST00000599538 ATP2C2O75185 946 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 CD4P01730 458 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 GNAT1P11488 350 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 GNL1P36915 607 aaPredicted RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 MDH1P40925 334 aaKnown RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 LILRA4P59901 499 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 BBS12Q6ZW61 710 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 UNC93AQ86WB7 457 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 OSTM1Q86WC4 334 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 NKD2Q969F2 451 aaPredicted RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 CALN1Q9BXU9 219 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 FAM129AQ9BZQ8 928 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 GPATCH2LQ9NWQ4 482 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 GDAP2Q9NXN4 497 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 ABT1Q9ULW3 272 aaKnown RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 CA12O43570 354 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 IFNB1P01574 187 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 CHRNA1P02708 482 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 TKTP29401 623 aaKnown RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 LSP1P33241 339 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 MRPS6P82932 125 aaKnown RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 GPS1Q13098 491 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 STILQ15468 1287 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 LONRF1Q17RB8 773 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 FAM47CQ5HY64 1035 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 NPNTQ6UXI9 565 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 GSTCDQ8NEC7 633 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 LPPQ93052 612 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 C9orf72Q96LT7 481 aa15.17■□□□□ 0.02
VRK3-217ENST00000599538 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
VRK3-217ENST00000599538 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.17■□□□□ 0.02
VRK3-217ENST00000599538 HESX1Q9UBX0 185 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms