RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 TTC16Q8NEE8 873 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 USP13Q92995 863 aaPredicted RBP24.02■■□□□ 1.44
CCDC9-204ENST00000599398 NELL2Q99435 816 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 BCO2Q9BYV7 579 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 NIF3L1Q9GZT8 377 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 TDP1Q9NUW8 608 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 TMEM30AQ9NV96 361 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 DLGAP2Q9P1A6 1054 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 NDRG2Q9UN36 371 aaKnown RBP24.02■■□□□ 1.44
CCDC9-204ENST00000599398 CCL26Q9Y258 94 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 PIEZO1Q92508 2521 aa24.02■■□□□ 1.44
CCDC9-204ENST00000599398 TRAV19A0A0A6YYK7 116 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 ARNTLO00327 626 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 CKMP06732 381 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 GLULP15104 373 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 CD58P19256 250 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 TARSP26639 723 aaKnown RBP24.01■■□□□ 1.43
CCDC9-204ENST00000599398 FBXL13Q8NEE6 735 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 TTC8Q8TAM2 541 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 CYP2S1Q96SQ9 504 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 PHOX2BQ99453 314 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 OSBPL6Q9BZF3 934 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 KIF9Q9HAQ2 790 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 CYP3A43Q9HB55 503 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 TRPM5Q9NZQ8 1165 aa24.01■■□□□ 1.43
CCDC9-204ENST00000599398 ARMCX3Q9UH62 379 aaPredicted RBP24.01■■□□□ 1.43
CCDC9-204ENST00000599398 NCAM2O15394 837 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 CCDC130P13994 396 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 MCCD1P59942 119 aaPredicted RBP24■■□□□ 1.43
CCDC9-204ENST00000599398 PLCB2Q00722 1185 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 MORC3Q14149 939 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 NELFBQ8WX92 580 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 FAM3CQ92520 227 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 SEMA4DQ92854 862 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 SMARCD1Q96GM5 515 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 KCNK16Q96T55 309 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 TTLL2Q9BWV7 592 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 KRT82Q9NSB4 513 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 FAM49BQ9NUQ9 324 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 RAB20Q9NX57 234 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 CTNND2Q9UQB3 1225 aa24■■□□□ 1.43
CCDC9-204ENST00000599398 CACNA1IQ9P0X4 2223 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 C2orf78A6NCI8 922 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 AP1G2O75843 785 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 ABL1P00519 1130 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 USP17L7P0C7H9 530 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 BMP6P22004 513 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 CAMK4Q16566 473 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 WDR44Q5JSH3 913 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 PAQR9Q6ZVX9 377 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 ALYREFQ86V81 257 aaKnown RBP23.99■■□□□ 1.43
CCDC9-204ENST00000599398 FUKQ8N0W3 1084 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 NUP93Q8N1F7 819 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 CRYBG2Q8N1P7 616 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 ARL14EPQ8N8R7 260 aaPredicted RBP23.99■■□□□ 1.43
CCDC9-204ENST00000599398 C12orf29Q8N999 325 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 SLC2A14Q8TDB8 520 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 SLC22A12Q96S37 553 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 NT5C1AQ9BXI3 368 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 DMAP1Q9NPF5 467 aaPredicted RBP23.99■■□□□ 1.43
CCDC9-204ENST00000599398 GTSE1Q9NYZ3 720 aa23.99■■□□□ 1.43
CCDC9-204ENST00000599398 KIF26AQ9ULI4 1882 aaPredicted RBP23.98■■□□□ 1.43
CCDC9-204ENST00000599398 BICDL2A1A5D9 508 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 SHISA7A6NL88 538 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 PPP1R3GB7ZBB8 358 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 ADORA2BP29275 332 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 SOX9P48436 509 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 TNK2Q07912 1038 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 INCA1Q0VD86 236 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 TAF10Q12962 218 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 ZNF268Q14587 947 aaPredicted RBP23.98■■□□□ 1.43
CCDC9-204ENST00000599398 CCDC40Q4G0X9 1142 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 CBWD6Q4V339 395 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 CBWD3Q5JTY5 395 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 CBWD5Q5RIA9 395 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 CC2D1AQ6P1N0 951 aaPredicted RBP23.98■■□□□ 1.43
CCDC9-204ENST00000599398 CEP63Q96MT8 703 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 SLITRK1Q96PX8 696 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 TWNKQ96RR1 684 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 DNAI2Q9GZS0 605 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 C8orf33Q9H7E9 229 aaPredicted RBP23.98■■□□□ 1.43
CCDC9-204ENST00000599398 GKN1Q9NS71 199 aa23.98■■□□□ 1.43
CCDC9-204ENST00000599398 SPATA6Q9NWH7 488 aaPredicted RBP23.98■■□□□ 1.43
CCDC9-204ENST00000599398 RTN3O95197 1032 aaPredicted RBP23.97■■□□□ 1.43
CCDC9-204ENST00000599398 HDCP19113 662 aa23.97■■□□□ 1.43
CCDC9-204ENST00000599398 PPP3CCP48454 512 aa23.97■■□□□ 1.43
CCDC9-204ENST00000599398 MRE11P49959 708 aa23.97■■□□□ 1.43
CCDC9-204ENST00000599398 PDE6CP51160 858 aa23.97■■□□□ 1.43
CCDC9-204ENST00000599398 C1orf210Q8IVY1 113 aa23.97■■□□□ 1.43
CCDC9-204ENST00000599398 DUSP9Q99956 384 aaKnown RBP23.97■■□□□ 1.43
CCDC9-204ENST00000599398 METTL14Q9HCE5 456 aaKnown RBP23.97■■□□□ 1.43
CCDC9-204ENST00000599398 CILPO75339 1184 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 YWHAQP27348 245 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 HOXD11P31277 338 aaPredicted RBP23.96■■□□□ 1.43
CCDC9-204ENST00000599398 MAGEA9P43362 315 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 MLLT6P55198 1093 aaPredicted RBP23.96■■□□□ 1.43
CCDC9-204ENST00000599398 STX17P56962 302 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 ITPRIPL2Q3MIP1 535 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 TTI2Q6NXR4 508 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 FILIP1Q7Z7B0 1213 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms