RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 SLITRK1Q96PX8 696 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 B3GNT5Q9BYG0 378 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 NIF3L1Q9GZT8 377 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 DMAP1Q9NPF5 467 aaPredicted RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 KRT82Q9NSB4 513 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 GTSE1Q9NYZ3 720 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 CCL26Q9Y258 94 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 TCHHQ07283 1943 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 SPECC1L-ADORA2AF8WAN1 911 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 SLC16A3O15427 465 aaKnown RBP15.54■□□□□ 0.08
XRCC1-208ENST00000598422 ABL1P00519 1130 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 CTHP32929 405 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 PPP1R2P41236 205 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 NDST1P52848 882 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 USP46P62068 366 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 LRRC63Q05C16 580 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 TNK2Q07912 1038 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 ORC1Q13415 861 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 LRRC32Q14392 662 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 MTF1Q14872 753 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 ITPRIPL2Q3MIP1 535 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 KRT39Q6A163 491 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 UNC93AQ86WB7 457 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 RALGPS2Q86X27 583 aaPredicted RBP15.54■□□□□ 0.08
XRCC1-208ENST00000598422 ARL14EPQ8N8R7 260 aaPredicted RBP15.54■□□□□ 0.08
XRCC1-208ENST00000598422 SPATA20Q8TB22 786 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 NKD2Q969F2 451 aaPredicted RBP15.54■□□□□ 0.08
XRCC1-208ENST00000598422 CLDN23Q96B33 292 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 IER2Q9BTL4 223 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 TTLL2Q9BWV7 592 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 CYP3A43Q9HB55 503 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 GKN1Q9NS71 199 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 HMGXB4Q9UGU5 601 aa15.54■□□□□ 0.08
XRCC1-208ENST00000598422 C2orf78A6NCI8 922 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 PROB1E7EW31 1015 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 AP1G2O75843 785 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 RTN3O95197 1032 aaPredicted RBP15.53■□□□□ 0.08
XRCC1-208ENST00000598422 CCDC130P13994 396 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 PFKLP17858 780 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 HDCP19113 662 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 CD58P19256 250 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 ANP32AP39687 249 aaKnown RBP15.53■□□□□ 0.08
XRCC1-208ENST00000598422 PPP3CCP48454 512 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 PDGFRLQ15198 375 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 ELOA2Q8IYF1 753 aaPredicted RBP15.53■□□□□ 0.08
XRCC1-208ENST00000598422 ADSSL1Q8N142 457 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 NUP93Q8N1F7 819 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 FBXO32Q969P5 355 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 LMAN1LQ9HAT1 526 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 FAM49BQ9NUQ9 324 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 MAN1B1Q9UKM7 699 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 COL4A3Q01955 1670 aa15.53■□□□□ 0.08
XRCC1-208ENST00000598422 WDFY4Q6ZS81 3184 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 SHISA7A6NL88 538 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 SP9P0CG40 484 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 YWHAQP27348 245 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 IFNAR2P48551 515 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 CACNA2D1P54289 1103 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 AMPD2Q01433 879 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 TAF10Q12962 218 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 USP4Q13107 963 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 PPP2R5DQ14738 602 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 WDR44Q5JSH3 913 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 ANKRD40Q6AI12 368 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 TRIM68Q6AZZ1 485 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 ISM2Q6H9L7 571 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 KLHL10Q6JEL2 608 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 FUKQ8N0W3 1084 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 FBXL13Q8NEE6 735 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 PDZD8Q8NEN9 1154 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 SLC2A14Q8TDB8 520 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 SH3RF2Q8TEC5 729 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 CYP2S1Q96SQ9 504 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 NT5C1AQ9BXI3 368 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 CHRDQ9H2X0 955 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 EBF3Q9H4W6 596 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 APOBEC3GQ9HC16 384 aaKnown RBP15.52■□□□□ 0.08
XRCC1-208ENST00000598422 DUS2Q9NX74 493 aaKnown RBP15.52■□□□□ 0.08
XRCC1-208ENST00000598422 ARMCX3Q9UH62 379 aaPredicted RBP15.52■□□□□ 0.08
XRCC1-208ENST00000598422 FBXO4Q9UKT5 387 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 ARHGAP26Q9UNA1 814 aa15.52■□□□□ 0.08
XRCC1-208ENST00000598422 TRIM49BA6NDI0 452 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 ZNF840PA6NDX5 716 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
XRCC1-208ENST00000598422 FAM200BP0CF97 657 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 ADORA2BP29275 332 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 SLC5A3P53794 718 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 PMS1P54277 932 aaKnown RBP15.51■□□□□ 0.07
XRCC1-208ENST00000598422 CSTF1Q05048 431 aaKnown RBP15.51■□□□□ 0.07
XRCC1-208ENST00000598422 INCA1Q0VD86 236 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 MTAPQ13126 283 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 RUNX3Q13761 415 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 ZNF77Q15935 545 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 CRYBG2Q8N1P7 616 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 CPA6Q8N4T0 437 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 TTC39CQ8N584 583 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 EXOC4Q96A65 974 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 DHTKD1Q96HY7 919 aaPredicted RBP15.51■□□□□ 0.07
XRCC1-208ENST00000598422 SLC22A12Q96S37 553 aa15.51■□□□□ 0.07
XRCC1-208ENST00000598422 KCNK16Q96T55 309 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms