RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MTIF2P46199 727 aaKnown RBP14.69□□□□□ -0.06
UPF1-205ENST00000598209 RAD23BP54727 409 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 GRM2Q14416 872 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 TXNDC8Q6A555 127 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 SASS6Q6UVJ0 657 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 MON1AQ86VX9 555 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 FAM114A1Q8IWE2 563 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 CMTM8Q8IZV2 173 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 SIX5Q8N196 739 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 NUP93Q8N1F7 819 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 PPM1KQ8N3J5 372 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 SLC4A11Q8NBS3 891 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 EHBP1Q8NDI1 1231 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 DEPDC1BQ8WUY9 529 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 RSPRY1Q96DX4 576 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 TMEM176AQ96HP8 235 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 HEXIM2Q96MH2 286 aaKnown RBP14.69□□□□□ -0.06
UPF1-205ENST00000598209 SMOQ99835 787 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 TRMT61BQ9BVS5 477 aaKnown RBP14.69□□□□□ -0.06
UPF1-205ENST00000598209 CA14Q9ULX7 337 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 COL4A2P08572 1712 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 SOBPA7XYQ1 873 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 DPYSL4O14531 572 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 BEST1O76090 585 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 RTN3O95197 1032 aaPredicted RBP14.68□□□□□ -0.06
UPF1-205ENST00000598209 PRAMEF12O95522 483 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 FAM200BP0CF97 657 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 PSMC3P17980 439 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 WEE1P30291 646 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 MAP3K7CLP57077 242 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 IFRD2Q12894 506 aaPredicted RBP14.68□□□□□ -0.06
UPF1-205ENST00000598209 PPP1R26Q5T8A7 1209 aaPredicted RBP14.68□□□□□ -0.06
UPF1-205ENST00000598209 MFSD6LQ8IWD5 586 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 SUGP1Q8IWZ8 645 aaKnown RBP14.68□□□□□ -0.06
UPF1-205ENST00000598209 FBXL6Q8N531 539 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 UBR7Q8N806 425 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 ZMIZ2Q8NF64 920 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 INTS2Q9H0H0 1204 aaKnown RBP14.68□□□□□ -0.06
UPF1-205ENST00000598209 SMG9Q9H0W8 520 aaKnown RBP14.68□□□□□ -0.06
UPF1-205ENST00000598209 MFSD1Q9H3U5 465 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 CSNK1G1Q9HCP0 422 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 TRPC7Q9HCX4 862 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 TRPM5Q9NZQ8 1165 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 GCNT4Q9P109 453 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 TMEM63CQ9P1W3 806 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 ZNF318Q5VUA4 2279 aa14.68□□□□□ -0.06
UPF1-205ENST00000598209 MIA3Q5JRA6 1907 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 KRBA1A5PL33 1030 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 TNFRSF10BO14763 440 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 YWHAQP27348 245 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 GDI1P31150 447 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 AVPR1AP37288 418 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 SLC5A3P53794 718 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 PFKPQ01813 784 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 TAF10Q12962 218 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 MAN2A1Q16706 1144 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 HSP90AA4PQ58FG1 418 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 CLEC20AQ6ZU45 233 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 RRAGAQ7L523 313 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 ARHGEF19Q8IW93 802 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 SCAMP5Q8TAC9 235 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 ENOX1Q8TC92 643 aaKnown RBP14.67□□□□□ -0.06
UPF1-205ENST00000598209 KAT5Q92993 513 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 FBXO32Q969P5 355 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 SLITRK1Q96PX8 696 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 BRD9Q9H8M2 597 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 ARHGEF3Q9NR81 526 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 ANO10Q9NW15 660 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 OBP2AQ9NY56 170 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 ZDBF2Q9HCK1 2354 aa14.67□□□□□ -0.06
UPF1-205ENST00000598209 COL4A3Q01955 1670 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 TRAV19A0A0A6YYK7 116 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 C2orf78A6NCI8 922 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 PPP3CCP48454 512 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 GCNT1Q02742 428 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 STX1AQ16623 288 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 IER5LQ5T953 404 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 ARHGAP17Q68EM7 881 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 TMEM270Q6UE05 265 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 GBP6Q6ZN66 633 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 C11orf57Q6ZUT1 292 aaPredicted RBP14.66□□□□□ -0.06
UPF1-205ENST00000598209 YAF2Q8IY57 180 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 CELF5Q8N6W0 485 aaKnown RBP14.66□□□□□ -0.06
UPF1-205ENST00000598209 FLCNQ8NFG4 579 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 USP13Q92995 863 aaPredicted RBP14.66□□□□□ -0.06
UPF1-205ENST00000598209 JAKMIP2Q96AA8 810 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 LRRC3BQ96PB8 259 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 SLC22A12Q96S37 553 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 CRACR2AQ9BSW2 395 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 DUSP16Q9BY84 665 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 SAMSN1Q9NSI8 373 aaKnown RBP14.66□□□□□ -0.06
UPF1-205ENST00000598209 COMMD8Q9NX08 183 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 IL37Q9NZH6 218 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 NFE2L3Q9Y4A8 694 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 PCDHB4Q9Y5E5 795 aa14.66□□□□□ -0.06
UPF1-205ENST00000598209 GTPBP10A4D1E9 387 aaKnown RBP14.65□□□□□ -0.06
UPF1-205ENST00000598209 ZNF840PA6NDX5 716 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 KCNJ18B7U540 433 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 HHLA1C9JL84 531 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 ZNF263O14978 683 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms