RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 UBR7Q8N806 425 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 MAB21L3Q8N8X9 362 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 FLCNQ8NFG4 579 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 DEPDC1BQ8WUY9 529 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 SMARCD1Q96GM5 515 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 GCNAQ96QF7 691 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 SLC22A12Q96S37 553 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 SMOQ99835 787 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 NT5C1AQ9BXI3 368 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 TBC1D17Q9HA65 648 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 CSNK1G1Q9HCP0 422 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 KRT82Q9NSB4 513 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 CISHQ9NSE2 258 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 UXTQ9UBK9 157 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 CCL26Q9Y258 94 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 KIAA1549LQ6ZVL6 1849 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 C2orf78A6NCI8 922 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 SOBPA7XYQ1 873 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 AP1G2O75843 785 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 AOC1P19801 751 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 DDX6P26196 483 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 ADORA2BP29275 332 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 GDI1P31150 447 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 RAD23BP54727 409 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 STARD6P59095 220 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 LRMPQ12912 555 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 CUL2Q13617 745 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 MLF2Q15773 248 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 SLC44A4Q53GD3 710 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 ZNF394Q53GI3 561 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 WDR44Q5JSH3 913 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 RBM43Q6ZSC3 357 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 MLKLQ8NB16 471 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 SLC4A11Q8NBS3 891 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 CCDC150Q8NCX0 1101 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 SCAMP5Q8TAC9 235 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 MRPS31Q92665 395 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 USP13Q92995 863 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 CYP2S1Q96SQ9 504 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 HNRNPABQ99729 332 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 MED10Q9BTT4 135 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 TRMT61BQ9BVS5 477 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 MFSD1Q9H3U5 465 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 BRD9Q9H8M2 597 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 DMAP1Q9NPF5 467 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 OBP2AQ9NY56 170 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 IL37Q9NZH6 218 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 GCNT4Q9P109 453 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 HCN4Q9Y3Q4 1203 aa11.66□□□□□ -0.54
SHKBP1-206ENST00000595523 FRYLO94915 3013 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 ATP8B3O60423 1300 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 ZNF840PA6NDX5 716 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 HHLA1C9JL84 531 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 GNA14O95837 355 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 CLCN5P51795 746 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 SLC5A3P53794 718 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 PFKPQ01813 784 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 TAF10Q12962 218 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 PPP1R26Q5T8A7 1209 aaPredicted RBP11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 PHLDB3Q6NSJ2 640 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 CLEC20AQ6ZU45 233 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 GPRIN1Q7Z2K8 1008 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 DNASE1L2Q92874 299 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 KAT5Q92993 513 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 CYFIP2Q96F07 1278 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 ZFYVE19Q96K21 471 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 CNOT6LQ96LI5 555 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 FOXQ1Q9C009 403 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 FAM124BQ9H5Z6 455 aaPredicted RBP11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 TRPV5Q9NQA5 729 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 HEBP1Q9NRV9 189 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.54
SHKBP1-206ENST00000595523 FAM92AA1XBS5 289 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 CHADO15335 359 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 P4HA2O15460 535 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 AFPP02771 609 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 ACO1P21399 889 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 CD72P21854 359 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 AVPR1AP37288 418 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 PGFP49763 221 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 MAP3K7CLP57077 242 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 ZXDBP98169 803 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 PRKCQQ04759 706 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 IFRD2Q12894 506 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 ZNF268Q14587 947 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 TPRG1Q6ZUI0 275 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 ARHGEF19Q8IW93 802 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 NUP93Q8N1F7 819 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 ZNF687Q8N1G0 1237 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 CELF5Q8N6W0 485 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 ARL14EPQ8N8R7 260 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 PJA1Q8NG27 643 aa11.64□□□□□ -0.55
SHKBP1-206ENST00000595523 BPIFB1Q8TDL5 484 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms