RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZCWPW2Q504Y3 356 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 ARHGAP15Q53QZ3 475 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 TRIM61Q5EBN2 209 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 FAM26FQ5R3K3 315 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 DYMQ7RTS9 669 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 PIP4P1Q86T03 277 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 GPBP1Q86WP2 473 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 CCDC65Q8IXS2 484 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 CCAR2Q8N163 923 aaKnown RBP13.77□□□□□ -0.21
SCAF1-202ENST00000595242 GLIS3Q8NEA6 775 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 APPL2Q8NEU8 664 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 BEST2Q8NFU1 509 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 ADAM32Q8TC27 787 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 PIGOQ8TEQ8 1089 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 MYO18AQ92614 2054 aaKnown RBP13.77□□□□□ -0.21
SCAF1-202ENST00000595242 SUSD3Q96L08 255 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 PANX2Q96RD6 677 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 FAM83CQ9BQN1 747 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 CCDC113Q9H0I3 377 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 EBF3Q9H4W6 596 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 HPS4Q9NQG7 708 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.21
SCAF1-202ENST00000595242 MAPK8IP1Q9UQF2 711 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 KALRNO60229 2985 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 ARHGAP6O43182 974 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 STX10O60499 249 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 BCKDHBP21953 392 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 GABRR2P28476 465 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 WEE1P30291 646 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 ALDH1A3P47895 512 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 GALK1P51570 392 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 AMPD2Q01433 879 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 DUSP4Q13115 394 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 SEMA3BQ13214 749 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 FBXO43Q4G163 708 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 ANKRD40Q6AI12 368 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 ALKAL1Q6UXT8 129 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 DNAJB7Q7Z6W7 309 aaPredicted RBP13.76□□□□□ -0.21
SCAF1-202ENST00000595242 ZC3H3Q8IXZ2 948 aaKnown RBP13.76□□□□□ -0.21
SCAF1-202ENST00000595242 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 ZNF507Q8TCN5 953 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 LRIG1Q96JA1 1093 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 ZMAT2Q96NC0 199 aaKnown RBP13.76□□□□□ -0.21
SCAF1-202ENST00000595242 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
SCAF1-202ENST00000595242 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
SCAF1-202ENST00000595242 TPSD1Q9BZJ3 242 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
SCAF1-202ENST00000595242 CRISPLD1Q9H336 500 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 TASP1Q9H6P5 420 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 SLC39A2Q9NP94 309 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 PANK4Q9NVE7 773 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 DNM3Q9UQ16 869 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 SLC27A5Q9Y2P5 690 aa13.76□□□□□ -0.21
SCAF1-202ENST00000595242 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCAF1-202ENST00000595242 GOLGA4Q13439 2230 aaKnown RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 UPK3BL1B0FP48 263 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 AKR1B15C9JRZ8 316 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 UPK3BL2E5RIL1 263 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 CCP110O43303 1012 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 MFAP3LO75121 409 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 KIF20AO95235 890 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 FGF19O95750 216 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 ENGP17813 658 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 FAM193AP78312 1265 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 ARSHQ5FYA8 562 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 XKR4Q5GH76 650 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 E4F1Q66K89 784 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 TRIM68Q6AZZ1 485 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 RAB44Q7Z6P3 723 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 TSTD1Q8NFU3 115 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 BSNDQ8WZ55 320 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 PSMG2Q969U7 264 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 ACDQ96AP0 544 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 P2RY13Q9BPV8 354 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 NAA15Q9BXJ9 866 aaKnown RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 CCDC86Q9H6F5 360 aaKnown RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 TOPORSQ9NS56 1045 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 TAB2Q9NYJ8 693 aa13.75□□□□□ -0.21
SCAF1-202ENST00000595242 MAGEC2Q9UBF1 373 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-202ENST00000595242 TENM4Q6N022 2769 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 KIF2AO00139 706 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-202ENST00000595242 TUBB4AP04350 444 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 IDEP14735 1019 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 OSTNP61366 133 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 CYP4F8P98187 520 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-202ENST00000595242 ZNF423Q2M1K9 1284 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 NAIF1Q69YI7 327 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-202ENST00000595242 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-202ENST00000595242 CNGA4Q8IV77 575 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 CEP120Q8N960 986 aa13.74□□□□□ -0.21
SCAF1-202ENST00000595242 DEPTORQ8TB45 409 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms