RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 PPP1R26Q5T8A7 1209 aaPredicted RBP15.92■□□□□ 0.14
UPF1-202ENST00000594243 ARHGAP17Q68EM7 881 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 TANGO2Q6ICL3 276 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 PHLDB3Q6NSJ2 640 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 TRIM65Q6PJ69 517 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 TMEM150AQ86TG1 271 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 ARID3BQ8IVW6 561 aaPredicted RBP15.92■□□□□ 0.14
UPF1-202ENST00000594243 UBR7Q8N806 425 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 ST13P5Q8NFI4 369 aaPredicted RBP15.92■□□□□ 0.14
UPF1-202ENST00000594243 SLITRK1Q96PX8 696 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 SMOQ99835 787 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 KXD1Q9BQD3 176 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 CRACR2AQ9BSW2 395 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 SLC46A2Q9BY10 475 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 UBE2TQ9NPD8 197 aaPredicted RBP15.92■□□□□ 0.14
UPF1-202ENST00000594243 TMEM30AQ9NV96 361 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 FANCLQ9NW38 375 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 TRPM5Q9NZQ8 1165 aa15.92■□□□□ 0.14
UPF1-202ENST00000594243 PES1O00541 588 aaKnown RBP15.91■□□□□ 0.14
UPF1-202ENST00000594243 DPYSL4O14531 572 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 BEST1O76090 585 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 PAEPP09466 180 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 VDRP11473 427 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 SLC9A1P19634 815 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 COL9A1P20849 921 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 ACO1P21399 889 aaKnown RBP15.91■□□□□ 0.14
UPF1-202ENST00000594243 YWHAQP27348 245 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 AVPR1AP37288 418 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 MFAP3P55082 362 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 SLC8A3P57103 927 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 USP46P62068 366 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 SGO2Q562F6 1265 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 MIIPQ5JXC2 388 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 TMEM31Q5JXX7 168 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 STXBP5Q5T5C0 1151 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 CDKAL1Q5VV42 579 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 TMEM270Q6UE05 265 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 CLEC20AQ6ZU45 233 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 MON1AQ86VX9 555 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 ARHGEF19Q8IW93 802 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 CMTM8Q8IZV2 173 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 MAB21L3Q8N8X9 362 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 PDZD8Q8NEN9 1154 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 ANKRD20A12PQ8NF67 263 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 OVCA2Q8WZ82 227 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 BPIFA3Q9BQP9 254 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 DUSP16Q9BY84 665 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 FBXO44Q9H4M3 255 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 PNPLA8Q9NP80 782 aa15.91■□□□□ 0.14
UPF1-202ENST00000594243 SMTNL1A8MU46 457 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 TNFRSF10BO14763 440 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 NARSO43776 548 aaKnown RBP15.9■□□□□ 0.14
UPF1-202ENST00000594243 NPR3P17342 541 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 PFKLP17858 780 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 PSMC3P17980 439 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
UPF1-202ENST00000594243 FCARP24071 287 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 PON1P27169 355 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 PDE6CP51160 858 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 SLC5A3P53794 718 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 IFRD2Q12894 506 aaPredicted RBP15.9■□□□□ 0.14
UPF1-202ENST00000594243 TAF10Q12962 218 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 ANO6Q4KMQ2 910 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 TXNDC8Q6A555 127 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 SMYD5Q6GMV2 418 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 MFSD6LQ8IWD5 586 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 ANKRD52Q8NB46 1076 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 ZMIZ2Q8NF64 920 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 DEPDC1BQ8WUY9 529 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 KAT5Q92993 513 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 TRMT61BQ9BVS5 477 aaKnown RBP15.9■□□□□ 0.14
UPF1-202ENST00000594243 PLA2G2FQ9BZM2 168 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 UBXN6Q9BZV1 441 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 SMOC2Q9H3U7 446 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 SLC2A4RGQ9NR83 387 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 OBP2AQ9NY56 170 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 IL37Q9NZH6 218 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 WNT16Q9UBV4 365 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 APEX2Q9UBZ4 518 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 RAPGEFL1Q9UHV5 662 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 FBXL21Q9UKT6 434 aa15.9■□□□□ 0.14
UPF1-202ENST00000594243 DOCK6Q96HP0 2047 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 TMEM221A6NGB7 291 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 HEPACAM2A8MVW5 462 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 PRR33A8MZF0 331 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 M0R296 226 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 CD19P15391 556 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 VIPR2P41587 438 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 GPC5P78333 572 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 PFKPQ01813 784 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 STILQ15468 1287 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 BMP8AQ7Z5Y6 402 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 CELF5Q8N6W0 485 aaKnown RBP15.89■□□□□ 0.13
UPF1-202ENST00000594243 ASIC4Q96FT7 647 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 KREMEN1Q96MU8 473 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 TRPC7Q9HCX4 862 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 HESX1Q9UBX0 185 aa15.89■□□□□ 0.13
UPF1-202ENST00000594243 PTPRDP23468 1912 aa15.88■□□□□ 0.13
UPF1-202ENST00000594243 TRAV19A0A0A6YYK7 116 aa15.88■□□□□ 0.13
UPF1-202ENST00000594243 SYCE3A1L190 88 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms