RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 FOXD4L1Q9NU39 408 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 POLR3BQ9NW08 1133 aaPredicted RBP24.2■■□□□ 1.46
SSBP4-203ENST00000593641 TRPM5Q9NZQ8 1165 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 PCDHGA5Q9Y5G8 931 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 SPTLC2O15270 562 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 APBB3O95704 486 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 DLATP10515 647 aaKnown RBP24.19■■□□□ 1.46
SSBP4-203ENST00000593641 TNNI1P19237 187 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 LIMK1P53667 647 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 DMC1Q14565 340 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 SNRNP35Q16560 246 aaKnown RBP24.19■■□□□ 1.46
SSBP4-203ENST00000593641 TRAPPC11Q7Z392 1133 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 DHX58Q96C10 678 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 PCED1BQ96HM7 432 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 ZC3H10Q96K80 434 aaKnown RBP24.19■■□□□ 1.46
SSBP4-203ENST00000593641 SNX25Q9H3E2 840 aa24.19■■□□□ 1.46
SSBP4-203ENST00000593641 NUP205Q92621 2012 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 PPP6R2O75170 966 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 ELF2Q15723 593 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 E2F4Q16254 413 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 MDH1BQ5I0G3 518 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 FAM26FQ5R3K3 315 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 IQUBQ8NA54 791 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 RDH13Q8NBN7 331 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 MYCBPAPQ8TBZ2 947 aa24.18■■□□□ 1.46
SSBP4-203ENST00000593641 ABCA7Q8IZY2 2146 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 MYOFQ9NZM1 2061 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 UBE4BO95155 1302 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 HOXD13P35453 343 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 GNL1P36915 607 aaPredicted RBP24.17■■□□□ 1.46
SSBP4-203ENST00000593641 MPLP40238 635 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 PPP3CCP48454 512 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 TNNC1P63316 161 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 PLK5Q496M5 336 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 HS2ST1Q7LGA3 356 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 OR6B3Q8NGW1 331 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 ZNF507Q8TCN5 953 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 EZH1Q92800 747 aaPredicted RBP24.17■■□□□ 1.46
SSBP4-203ENST00000593641 ZNF396Q96N95 335 aaPredicted RBP24.17■■□□□ 1.46
SSBP4-203ENST00000593641 CGRRF1Q99675 332 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 LINC00597Q9H2U6 94 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 AGPAT3Q9NRZ7 376 aa24.17■■□□□ 1.46
SSBP4-203ENST00000593641 THADAQ6YHU6 1953 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 F8VP50 259 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 CYP2J2P51589 502 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 USP46P62068 366 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 NOP14P78316 857 aaKnown RBP24.16■■□□□ 1.46
SSBP4-203ENST00000593641 EPM2AIP1Q7L775 607 aaPredicted RBP24.16■■□□□ 1.46
SSBP4-203ENST00000593641 CCDC127Q96BQ5 260 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 MRPL45Q9BRJ2 306 aaKnown RBP24.16■■□□□ 1.46
SSBP4-203ENST00000593641 TTLL2Q9BWV7 592 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 VPS45Q9NRW7 570 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 EBF1Q9UH73 591 aa24.16■■□□□ 1.46
SSBP4-203ENST00000593641 K7ELQ4 463 aaPredicted RBP24.15■■□□□ 1.46
SSBP4-203ENST00000593641 LEFTY2O00292 366 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 TACC1O75410 805 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 RHOBTB1O94844 696 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 SNRPFP62306 86 aaKnown RBP24.15■■□□□ 1.46
SSBP4-203ENST00000593641 CYP24A1Q07973 514 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 PSMD6Q15008 389 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 PLA2G2CQ5R387 149 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 NELFCDQ8IXH7 590 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 XXYLT1Q8NBI6 393 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 TSTD1Q8NFU3 115 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 C8orf48Q96LL4 319 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 ELOVL4Q9GZR5 314 aa24.15■■□□□ 1.46
SSBP4-203ENST00000593641 MYH10P35580 1976 aa24.14■■□□□ 1.46
SSBP4-203ENST00000593641 ZNF840PA6NDX5 716 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 CLIC2O15247 247 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 TGFB1I1O43294 461 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 CUTAO60888 179 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 YEATS4O95619 227 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 ABL1P00519 1130 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 CST3P01034 146 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-203ENST00000593641 FAM163BP0C2L3 166 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 GBP1P32455 592 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 DGKEP52429 567 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 TRPC3Q13507 836 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 WDR72Q3MJ13 1102 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 TDRD10Q5VZ19 366 aaKnown RBP24.14■■□□□ 1.45
SSBP4-203ENST00000593641 CNNM4Q6P4Q7 775 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 KIAA1958Q8N8K9 716 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 SLITRK1Q96PX8 696 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 DUSP15Q9H1R2 295 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-203ENST00000593641 MAGEF1Q9HAY2 307 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 RXFP3Q9NSD7 469 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 TFIP11Q9UBB9 837 aaKnown RBP24.14■■□□□ 1.45
SSBP4-203ENST00000593641 CPQQ9Y646 472 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 MYO18AQ92614 2054 aaKnown RBP24.14■■□□□ 1.45
SSBP4-203ENST00000593641 LAMA1P25391 3075 aa24.14■■□□□ 1.45
SSBP4-203ENST00000593641 SLC9A3R1O14745 358 aaPredicted RBP24.13■■□□□ 1.45
SSBP4-203ENST00000593641 CLSTN1O94985 981 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 SEC13P55735 322 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 SLC7A9P82251 487 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 ZXDBP98169 803 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 STPG1Q5TH74 334 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 UNC13DQ70J99 1090 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 SCFD1Q8WVM8 642 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 C7orf25Q9BPX7 421 aa24.13■■□□□ 1.45
SSBP4-203ENST00000593641 SMOC1Q9H4F8 434 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms