RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CHP1Q99653 195 aa12.64□□□□□ -0.39
DDX39A-219ENST00000592927 CLSTN3Q9BQT9 956 aa12.64□□□□□ -0.39
DDX39A-219ENST00000592927 MRPL45Q9BRJ2 306 aaKnown RBP12.64□□□□□ -0.39
DDX39A-219ENST00000592927 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
DDX39A-219ENST00000592927 UBE2TQ9NPD8 197 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-219ENST00000592927 DDX43Q9NXZ2 648 aaKnown RBP12.64□□□□□ -0.39
DDX39A-219ENST00000592927 CDY1Q9Y6F8 540 aa12.64□□□□□ -0.39
DDX39A-219ENST00000592927 EPN1Q9Y6I3 576 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-219ENST00000592927 SCN1AP35498 2009 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 EIF3CLB5ME19 914 aaKnown RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 GABRDO14764 452 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 TBC1D4O60343 1298 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 CLASP2O75122 1294 aaKnown RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 GFPT2O94808 682 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 NDUFA10O95299 355 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 IPO7O95373 1038 aaKnown RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 CCDC175P0C221 793 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 TBXAS1P24557 533 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 PCSK1P29120 753 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 OR1D2P34982 312 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 ARPP19P56211 112 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 KRT83P78385 493 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 CUL2Q13617 745 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 HGSNATQ68CP4 663 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 GJB7Q6PEY0 223 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 RSPO2Q6UXX9 243 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 RAD9BQ6WBX8 426 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 IRF2BP2Q7Z5L9 587 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 OSTM1Q86WC4 334 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 GLYCTKQ8IVS8 523 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 ARHGEF19Q8IW93 802 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 PPM1KQ8N3J5 372 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 TXLNBQ8N3L3 684 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 KBTBD7Q8WVZ9 684 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 CCDC42Q96M95 316 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 EIF3CQ99613 913 aaKnown RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 ACBD6Q9BR61 282 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 BCO2Q9BYV7 579 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 SDCBP2Q9H190 292 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 NHEJ1Q9H9Q4 299 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-219ENST00000592927 SPTLC3Q9NUV7 552 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 ARHGAP20Q9P2F6 1191 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 DUSP12Q9UNI6 340 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 USTQ9Y2C2 406 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 SPTBN2O15020 2390 aa12.63□□□□□ -0.39
DDX39A-219ENST00000592927 A8MXQ7 604 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 ADAM12O43184 909 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 LCA5LO95447 670 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 CPB1P15086 417 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 CD58P19256 250 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 LMO2P25791 158 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 YWHAEP62258 255 aaKnown RBP12.62□□□□□ -0.39
DDX39A-219ENST00000592927 TSPY1Q01534 308 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 LMNB2Q03252 620 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 DMWDQ09019 674 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 KLHL30Q0D2K2 578 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 RAB33AQ14088 237 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 ARHGAP44Q17R89 818 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 TDRD12Q587J7 1177 aaKnown RBP12.62□□□□□ -0.39
DDX39A-219ENST00000592927 SLC8B1Q6J4K2 584 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 VPS36Q86VN1 386 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 TTC39CQ8N584 583 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 C12orf76Q8N812 135 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-219ENST00000592927 OR10T2Q8NGX3 314 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 SHC3Q92529 594 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 GPR88Q9GZN0 384 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 DEF6Q9H4E7 631 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 FAM124BQ9H5Z6 455 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-219ENST00000592927 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
DDX39A-219ENST00000592927 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-219ENST00000592927 PPP2R2CQ9Y2T4 447 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 HCFC2Q9Y5Z7 792 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
DDX39A-219ENST00000592927 KRBA1A5PL33 1030 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 NARSO43776 548 aaKnown RBP12.61□□□□□ -0.39
DDX39A-219ENST00000592927 GLUD1P00367 558 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 TUBB4AP04350 444 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 DCNP07585 359 aaKnown RBP12.61□□□□□ -0.39
DDX39A-219ENST00000592927 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 ACAT1P24752 427 aaKnown RBP12.61□□□□□ -0.39
DDX39A-219ENST00000592927 NDST1P52848 882 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 ROR1Q01973 937 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-219ENST00000592927 PPM1JQ5JR12 505 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 ATAT1Q5SQI0 421 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 RARS2Q5T160 578 aaKnown RBP12.61□□□□□ -0.39
DDX39A-219ENST00000592927 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 UNC93AQ86WB7 457 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 C1orf210Q8IVY1 113 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 FAM71AQ8IYT1 594 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 DCP1BQ8IZD4 617 aaKnown RBP12.61□□□□□ -0.39
DDX39A-219ENST00000592927 TNIP3Q96KP6 325 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms