RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 AURKCQ9UQB9 309 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 F5H5T6 163 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 ACADSP16219 412 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 DAB2P98082 770 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 CUL2Q13617 745 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 L2HGDHQ9H9P8 463 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 TBC1D4O60343 1298 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 F9P00740 461 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 VDRP11473 427 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 KLRC2P26717 231 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 HMOX2P30519 316 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 SESN2P58004 480 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 CPB2Q96IY4 423 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 RPRD1AQ96P16 312 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 RAB6BQ9NRW1 208 aa13.83□□□□□ -0.2
SMARCA4-216ENST00000591545 MYL2P10916 166 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 POLD3Q15054 466 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 CYTH1Q15438 398 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 KYNUQ16719 465 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 ARMC6Q6NXE6 501 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 WDR93Q6P2C0 686 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 USP49Q70CQ1 688 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 MFN1Q8IWA4 741 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 EME1Q96AY2 570 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 CDYLQ9Y232 598 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 GAKO14976 1311 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 ADCYAP1R1P41586 468 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 RAP1GDS1P52306 607 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 MAP2K5Q13163 448 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 FBXW10Q5XX13 1052 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 SLC4A9Q96Q91 983 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 GID8Q9NWU2 228 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 ZNF229Q9UJW7 825 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 FHOD1Q9Y613 1164 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 NDUFS3O75489 264 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 PRLRP16471 622 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 RANBP1P43487 201 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 GRB10Q13322 594 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 SEZ6Q53EL9 994 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 NSL1Q96IY1 281 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 AGAP3Q96P47 875 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 CGRRF1Q99675 332 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 THG1LQ9NWX6 298 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 PDP2Q9P2J9 529 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 XYLBO75191 536 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 APRTP07741 180 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 CNTN2Q02246 1040 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 AMHR2Q16671 573 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 C9orf72Q96LT7 481 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 APBA2Q99767 749 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 MTMR12Q9C0I1 747 aa13.82□□□□□ -0.2
SMARCA4-216ENST00000591545 TCRBV5S4A2TA0A5A2 114 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 E7ENQ6 273 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 APOA4P06727 396 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 IGFBP4P22692 258 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 CYLC2Q14093 348 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 ITIH4Q14624 930 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 ADCK1Q86TW2 530 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 GPR63Q9BZJ6 419 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 ARHGEF38Q9NXL2 777 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 NDUFA13Q9P0J0 144 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 SEPT3Q9UH03 358 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 HLA-DPA1P20036 260 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 VHLP40337 213 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 MIB1Q86YT6 1006 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 TNIP2Q8NFZ5 429 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 WDR18Q9BV38 432 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 WDCPQ9H6R7 721 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 TBC1D12O60347 775 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 FBXO21O94952 628 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 MYL4P12829 197 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 SLC9A1P19634 815 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 SLC27A1Q6PCB7 646 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 HOMEZQ8IX15 550 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 TAGAPQ8N103 731 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 CINPQ9BW66 212 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 CXorf56Q9H5V9 222 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 ALG13Q9NP73 1137 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 FAM198AQ9UFP1 575 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 AKAP10O43572 662 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 COMTP21964 271 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 S100A5P33763 92 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 USP10Q14694 798 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 KLHDC7AQ5VTJ3 777 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms