RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SMARCD1Q96GM5 515 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 LRRC3BQ96PB8 259 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 TWNKQ96RR1 684 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 KCNK16Q96T55 309 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 ARID3AQ99856 593 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 TTLL2Q9BWV7 592 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 DNAI2Q9GZS0 605 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 BRD9Q9H8M2 597 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 DMAP1Q9NPF5 467 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-223ENST00000591239 ARHGEF3Q9NR81 526 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 CISHQ9NSE2 258 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 FAM49BQ9NUQ9 324 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 EHD2Q9NZN4 543 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 ZNF318Q5VUA4 2279 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 ZNF263O14978 683 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 P4HA2O15460 535 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 BEST1O76090 585 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 CCDC192P0DO97 292 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 GDI1P31150 447 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 AVPR1AP37288 418 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 VCPP55072 806 aaKnown RBP9.75□□□□□ -0.85
DNMT1-223ENST00000591239 FCHO2Q0JRZ9 810 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 CETN1Q12798 172 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 CUL2Q13617 745 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 DPCR1Q3MIW9 517 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 CWF19L1Q69YN2 538 aaKnown RBP9.75□□□□□ -0.85
DNMT1-223ENST00000591239 PHLDB3Q6NSJ2 640 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 YAF2Q8IY57 180 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 NUP93Q8N1F7 819 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 IRF7Q92985 503 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 CYFIP2Q96F07 1278 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 SHDQ96IW2 340 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 HEXIM2Q96MH2 286 aaKnown RBP9.75□□□□□ -0.85
DNMT1-223ENST00000591239 CYP2S1Q96SQ9 504 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 HNRNPABQ99729 332 aaKnown RBP9.75□□□□□ -0.85
DNMT1-223ENST00000591239 SMOQ99835 787 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 SMG9Q9H0W8 520 aaKnown RBP9.75□□□□□ -0.85
DNMT1-223ENST00000591239 FAM124BQ9H5Z6 455 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-223ENST00000591239 TBC1D17Q9HA65 648 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 CSNK1G1Q9HCP0 422 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 TRPC7Q9HCX4 862 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 KRT82Q9NSB4 513 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 TDP1Q9NUW8 608 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 OBP2AQ9NY56 170 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.75□□□□□ -0.85
DNMT1-223ENST00000591239 GREB1Q4ZG55 1949 aa9.75□□□□□ -0.85
DNMT1-223ENST00000591239 DENND4CQ5VZ89 1909 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TRAV19A0A0A6YYK7 116 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 C2orf78A6NCI8 922 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TNFRSF10BO14763 440 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 CHADO15335 359 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 PI15O43692 258 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 RTN3O95197 1032 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 AFPP02771 609 aaKnown RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 FAM200BP0CF97 657 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 AOC1P19801 751 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 RFX1P22670 979 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TBXAS1P24557 533 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 YWHAQP27348 245 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 ADORA2BP29275 332 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 PPP3CCP48454 512 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 RAD23BP54727 409 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 MAP3K7CLP57077 242 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 STARD6P59095 220 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 PRKCQQ04759 706 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 IFRD2Q12894 506 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 LRMPQ12912 555 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TAF10Q12962 218 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 MLF2Q15773 248 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TPD52L1Q16890 204 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 PPP1R26Q5T8A7 1209 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 IRF2BP1Q8IU81 584 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 CREBRFQ8IUR6 639 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 CELF5Q8N6W0 485 aaKnown RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TMEM105Q8N8V8 129 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 SLC4A11Q8NBS3 891 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 ZMIZ2Q8NF64 920 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 SCAMP5Q8TAC9 235 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 LMO3Q8TAP4 145 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 BPIFB1Q8TDL5 484 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 DNASE1L2Q92874 299 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 USP13Q92995 863 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TMEM176AQ96HP8 235 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 CNOT6LQ96LI5 555 aaKnown RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 SLITRK1Q96PX8 696 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 KCNH6Q9H252 994 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TRPV5Q9NQA5 729 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 HEBP1Q9NRV9 189 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 IL37Q9NZH6 218 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 TRPM5Q9NZQ8 1165 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 DACH1Q9UI36 760 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 CCL26Q9Y258 94 aa9.74□□□□□ -0.85
DNMT1-223ENST00000591239 ARIH1Q9Y4X5 557 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-223ENST00000591239 MYO15AQ9UKN7 3530 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 DMDP11532 3685 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 OBSL1O75147 1896 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 NUP210Q8TEM1 1887 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ZNF840PA6NDX5 716 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms