RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ZNF668Q96K58 619 aaPredicted RBP8.7□□□□□ -1.02
SMAD4-209ENST00000589941 FCRL2Q96LA5 508 aaPredicted RBP8.7□□□□□ -1.02
SMAD4-209ENST00000589941 HNRNPABQ99729 332 aaKnown RBP8.7□□□□□ -1.02
SMAD4-209ENST00000589941 AMNQ9BXJ7 453 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 RHOBTB2Q9BYZ6 727 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 NRDE2Q9H7Z3 1164 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 ANKFY1Q9P2R3 1169 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 R3HCC1Q9Y3T6 440 aaKnown RBP8.7□□□□□ -1.02
SMAD4-209ENST00000589941 MUC22E2RYF6 1773 aaPredicted RBP8.7□□□□□ -1.02
SMAD4-209ENST00000589941 USP9XQ93008 2570 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-209ENST00000589941 ATG2BQ96BY7 2078 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 TEP1Q99973 2627 aaKnown RBP8.69□□□□□ -1.02
SMAD4-209ENST00000589941 FITM1A5D6W6 292 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 ZNF503-AS2A6NEH8 195 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 RRN3P2A6NIE6 340 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 SUSD5O60279 629 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 PSPNO60542 156 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 EPN2O95208 641 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 RPLP2P05387 115 aaKnown RBP8.69□□□□□ -1.02
SMAD4-209ENST00000589941 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 FGFR4P22455 802 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 GALK1P51570 392 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 HAND2P61296 217 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 POU4F1Q01851 419 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 TROAPQ12815 778 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 GIT2Q14161 759 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 RABEP1Q15276 862 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 DDR2Q16832 855 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 DPY19L1Q2PZI1 675 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 KLHL40Q2TBA0 621 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 RSPO2Q6UXX9 243 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-209ENST00000589941 TAS1R1Q7RTX1 841 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 OXR1Q8N573 874 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 ANKS4BQ8N8V4 417 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 SEPT1Q8WYJ6 367 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 SENP7Q9BQF6 1050 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 EDEM2Q9BV94 578 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 PLA2G2FQ9BZM2 168 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 RNF32Q9H0A6 362 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 SMARCAD1Q9H4L7 1026 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 TBC1D13Q9NVG8 400 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMAD4-209ENST00000589941 AKT3Q9Y243 479 aa8.69□□□□□ -1.02
SMAD4-209ENST00000589941 ATMQ13315 3056 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 COL12A1Q99715 3063 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ACACAQ13085 2346 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 FADS2P1A8MWK0 482 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 F8W810 466 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 GCOM1H8Y6P7 765 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 GPR32O75388 356 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 GLUD1P00367 558 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ZFYP08048 801 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 POLR2MP0CAP2 368 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 GSPT1P15170 499 aaKnown RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ZNF143P52747 638 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 RAB33AQ14088 237 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 BMS1Q14692 1282 aaKnown RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 NR0B2Q15466 257 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ASPRV1Q53RT3 343 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 TTC22Q5TAA0 569 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 Q6ZS52 159 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 KBTBD6Q86V97 674 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 GAS2L3Q86XJ1 694 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ZNF280BQ86YH2 543 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 BVESQ8NE79 360 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ITFG1Q8TB96 612 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 MTMR8Q96EF0 704 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 LIN37Q96GY3 246 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 B3GALT6Q96L58 329 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 MRPL9Q9BYD2 267 aaKnown RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 NT5C3AQ9H0P0 336 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ECHDC1Q9NTX5 307 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 CDH7Q9ULB5 785 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 GPR55Q9Y2T6 319 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-209ENST00000589941 EMC9Q9Y3B6 208 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 NEUROG3Q9Y4Z2 214 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 ARID2Q68CP9 1835 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 THADAQ6YHU6 1953 aa8.68□□□□□ -1.02
SMAD4-209ENST00000589941 C4orf47A7E2U8 309 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 FGF10O15520 208 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-209ENST00000589941 FOXD2O60548 495 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-209ENST00000589941 GLI1P08151 1106 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 KLRC1P26715 233 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 MPLP40238 635 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 KIR2DL1P43626 348 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-209ENST00000589941 KIR2DL2P43627 348 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-209ENST00000589941 TSC2P49815 1807 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 CCR3P51677 355 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 AK2P54819 239 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 CHRNEQ04844 493 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 KIR3DS1Q14943 382 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 HS1BP3Q53T59 392 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 ANKRD45Q5TZF3 282 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 ZNF852Q6ZMS4 543 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 CEP128Q6ZU80 1094 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 CEP68Q76N32 757 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 GRASPQ7Z6J2 395 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-209ENST00000589941 HOMER1Q86YM7 354 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 SPPL2CQ8IUH8 684 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 ING5Q8WYH8 240 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms