RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 STARD6P59095 220 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 YWHAEP62258 255 aaKnown RBP17.94■□□□□ 0.46
H3F3B-208ENST00000589599 TPD52L1Q16890 204 aaPredicted RBP17.94■□□□□ 0.46
H3F3B-208ENST00000589599 PAQR9Q6ZVX9 377 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 C12orf29Q8N999 325 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 TATDN2Q93075 761 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 RSPRY1Q96DX4 576 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 CYFIP2Q96F07 1278 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 HEXIM2Q96MH2 286 aaKnown RBP17.94■□□□□ 0.46
H3F3B-208ENST00000589599 SLITRK1Q96PX8 696 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 HNRNPABQ99729 332 aaKnown RBP17.94■□□□□ 0.46
H3F3B-208ENST00000589599 TTLL2Q9BWV7 592 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 TRPV5Q9NQA5 729 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 KRT82Q9NSB4 513 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 CISHQ9NSE2 258 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 FAM49BQ9NUQ9 324 aa17.94■□□□□ 0.46
H3F3B-208ENST00000589599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.94■□□□□ 0.46
H3F3B-208ENST00000589599 CHADO15335 359 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 P4HA2O15460 535 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 USP17L7P0C7H9 530 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 FAM200BP0CF97 657 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 YWHAQP27348 245 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 MARSP56192 900 aaKnown RBP17.93■□□□□ 0.46
H3F3B-208ENST00000589599 USP46P62068 366 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 FCHO2Q0JRZ9 810 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 ARHGAP29Q52LW3 1261 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 CWF19L1Q69YN2 538 aaKnown RBP17.93■□□□□ 0.46
H3F3B-208ENST00000589599 CREBRFQ8IUR6 639 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 TRIM59Q8IWR1 403 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 TMEM105Q8N8V8 129 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 BPIFB1Q8TDL5 484 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 CSGALNACT1Q8TDX6 532 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 TWNKQ96RR1 684 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 KCNK16Q96T55 309 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 SMG9Q9H0W8 520 aaKnown RBP17.93■□□□□ 0.46
H3F3B-208ENST00000589599 KIF9Q9HAQ2 790 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 TDP1Q9NUW8 608 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 COMMD8Q9NX08 183 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 SIT1Q9Y3P8 196 aa17.93■□□□□ 0.46
H3F3B-208ENST00000589599 PRAMEF12O95522 483 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 ABL1P00519 1130 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 AFPP02771 609 aaKnown RBP17.92■□□□□ 0.46
H3F3B-208ENST00000589599 CKMP06732 381 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 PFKLP17858 780 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 HDCP19113 662 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 TBXAS1P24557 533 aaPredicted RBP17.92■□□□□ 0.46
H3F3B-208ENST00000589599 ADORA2BP29275 332 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 PLCB2Q00722 1185 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 LRMPQ12912 555 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 TAF10Q12962 218 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 CUL2Q13617 745 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 ZNF268Q14587 947 aaPredicted RBP17.92■□□□□ 0.46
H3F3B-208ENST00000589599 ZNF394Q53GI3 561 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 IER5LQ5T953 404 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 PDZD8Q8NEN9 1154 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 WHAMMQ8TF30 809 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 USP13Q92995 863 aaPredicted RBP17.92■□□□□ 0.46
H3F3B-208ENST00000589599 TMEM176AQ96HP8 235 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 NT5C1BQ96P26 610 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 NELL2Q99435 816 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 TMEM30AQ9NV96 361 aa17.92■□□□□ 0.46
H3F3B-208ENST00000589599 MRPS17Q9Y2R5 130 aaKnown RBP17.92■□□□□ 0.46
H3F3B-208ENST00000589599 ZDBF2Q9HCK1 2354 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 KANSL1LA0AUZ9 987 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 ZNF840PA6NDX5 716 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 MAN2B1O00754 1011 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 PI15O43692 258 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 TADA3O75528 432 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 GLULP15104 373 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 MAP3K7CLP57077 242 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 IFRD2Q12894 506 aaPredicted RBP17.91■□□□□ 0.46
H3F3B-208ENST00000589599 CC2D1AQ6P1N0 951 aaPredicted RBP17.91■□□□□ 0.46
H3F3B-208ENST00000589599 ZNF852Q6ZMS4 543 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 TPRG1Q6ZUI0 275 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 OVCA2Q8WZ82 227 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 FBXO32Q969P5 355 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 LRRC3BQ96PB8 259 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 CYP2S1Q96SQ9 504 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 SMOQ99835 787 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 ARID3AQ99856 593 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 CSNK1G1Q9HCP0 422 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 HEBP1Q9NRV9 189 aa17.91■□□□□ 0.46
H3F3B-208ENST00000589599 TNFRSF10BO14763 440 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 ERCC5P28715 1186 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-208ENST00000589599 KPNA1P52294 538 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-208ENST00000589599 RAD23BP54727 409 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 MLLT6P55198 1093 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-208ENST00000589599 CT47A1Q5JQC4 288 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-208ENST00000589599 ARL14EPQ8N8R7 260 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-208ENST00000589599 EHBP1Q8NDI1 1231 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 GPT2Q8TD30 523 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 CNOT6LQ96LI5 555 aaKnown RBP17.9■□□□□ 0.46
H3F3B-208ENST00000589599 DDX23Q9BUQ8 820 aaKnown RBP17.9■□□□□ 0.46
H3F3B-208ENST00000589599 IRF2BPLQ9H1B7 796 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 FBXO44Q9H4M3 255 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 GCNT4Q9P109 453 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 CCL26Q9Y258 94 aa17.9■□□□□ 0.46
H3F3B-208ENST00000589599 C2orf78A6NCI8 922 aa17.89■□□□□ 0.45
H3F3B-208ENST00000589599 FAM170BA6NMN3 283 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms