RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 EXOC4Q96A65 974 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 PCED1BQ96HM7 432 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 SMYD3Q9H7B4 428 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 TRPC7Q9HCX4 862 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 SPATA6Q9NWH7 488 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 MAPK8IP1Q9UQF2 711 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 ATG2BQ96BY7 2078 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 PRR5-ARHGAP8B1AHC4 643 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 LAMTOR5O43504 91 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 HCRTO43612 131 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 ATP2C2O75185 946 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 F11P03951 625 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 CKMP06732 381 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 USP17L7P0C7H9 530 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 HMGA1P17096 107 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 PFKLP17858 780 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 LMO2P25791 158 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 TARSP26639 723 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 RPS9P46781 194 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 PPP3CCP48454 512 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 MLLT6P55198 1093 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 ARHGAP8P85298 464 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 LMNB2Q03252 620 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 ADAM9Q13443 819 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 ZNF268Q14587 947 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 PPP2R5DQ14738 602 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 SDHAF4Q5VUM1 108 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 CC2D1AQ6P1N0 951 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 POTEHQ6S545 545 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 MON1AQ86VX9 555 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 MAB21L3Q8N8X9 362 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 FAM3CQ92520 227 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 SMARCD1Q96GM5 515 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 MYRFLQ96LU7 910 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 RTKNQ9BST9 563 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 MED10Q9BTT4 135 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 XYLT2Q9H1B5 865 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 CRTAC1Q9NQ79 661 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 CDV3Q9UKY7 258 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 SPAG17Q6Q759 2223 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 RALGAPA1Q6GYQ0 2036 aa11.28□□□□□ -0.6
CLPTM1-211ENST00000589347 PSMA7O14818 248 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 SLC16A3O15427 465 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 TADA3O75528 432 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 RTN3O95197 1032 aaPredicted RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 VNN1O95497 513 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 HLA-DRAP01903 254 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 TRIM49P0CI25 452 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 TRIM49CP0CI26 452 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 PTPN1P18031 435 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 GTF2H1P32780 548 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 RAP1GAPP47736 663 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 MXI1P50539 228 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 NOP14P78316 857 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 DLG4P78352 724 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 AMPD2Q01433 879 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 COL9A2Q14055 689 aaPredicted RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 CCDC142Q17RM4 750 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 ZNF528Q3MIS6 628 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 ZCWPW2Q504Y3 356 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 SCARA3Q6AZY7 606 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 FAM35AQ86V20 835 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 UNC93AQ86WB7 457 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 SMYD4Q8IYR2 804 aaPredicted RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 TTC39CQ8N584 583 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 STKLD1Q8NE28 680 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 PDZD8Q8NEN9 1154 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 C8orf48Q96LL4 319 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 SLITRK1Q96PX8 696 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 DPEP3Q9H4B8 488 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 TMEM8AQ9HCN3 771 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 DMAP1Q9NPF5 467 aaPredicted RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 TDP1Q9NUW8 608 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 NDRG2Q9UN36 371 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 MYOFQ9NZM1 2061 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 NCANO14594 1321 aa11.27□□□□□ -0.61
CLPTM1-211ENST00000589347 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 F8VP50 259 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 ARNTLO00327 626 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 AKAP3O75969 853 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 ASS1P00966 412 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 CD72P21854 359 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 TGM1P22735 817 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 ANP32AP39687 249 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 GCLMP48507 274 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 LRRC63Q05C16 580 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 IFRD2Q12894 506 aaPredicted RBP11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 USP4Q13107 963 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 PDGFRLQ15198 375 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 ITPRIPL2Q3MIP1 535 aa11.26□□□□□ -0.61
CLPTM1-211ENST00000589347 KRT39Q6A163 491 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms