RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.39■□□□□ 0.85
CIRBP-217ENST00000588230 HEPACAM2A8MVW5 462 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 PMM2O15305 246 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 PSMC3P17980 439 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 RFX1P22670 979 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 CACNA2D1P54289 1103 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 MARSP56192 900 aaKnown RBP20.38■□□□□ 0.85
CIRBP-217ENST00000588230 LRMPQ12912 555 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 DPCR1Q3MIW9 517 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 VITQ6UXI7 678 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 PAQR9Q6ZVX9 377 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 MON1AQ86VX9 555 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 FUKQ8N0W3 1084 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 MAB21L3Q8N8X9 362 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 C12orf29Q8N999 325 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 SLC2A14Q8TDB8 520 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 DEPDC1BQ8WUY9 529 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 FOXQ1Q9C009 403 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 BRD9Q9H8M2 597 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 DMAP1Q9NPF5 467 aaPredicted RBP20.38■□□□□ 0.85
CIRBP-217ENST00000588230 KRT82Q9NSB4 513 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 CISHQ9NSE2 258 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 TMEM30AQ9NV96 361 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 FAM86C1Q9NVL1 165 aa20.38■□□□□ 0.85
CIRBP-217ENST00000588230 F5P12259 2224 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 SOBPA7XYQ1 873 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 H0Y858 1186 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 STK25O00506 426 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 P4HA2O15460 535 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 AP1G2O75843 785 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 AFPP02771 609 aaKnown RBP20.37■□□□□ 0.85
CIRBP-217ENST00000588230 GLULP15104 373 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 WEE1P30291 646 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 AVPR1AP37288 418 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 KCNH2Q12809 1159 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 MLF2Q15773 248 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-217ENST00000588230 SLC44A4Q53GD3 710 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 ZNF394Q53GI3 561 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 TXNDC8Q6A555 127 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 MFSD6LQ8IWD5 586 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 YAF2Q8IY57 180 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 CMTM8Q8IZV2 173 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 WHAMMQ8TF30 809 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 MED15Q96RN5 788 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 KCNK16Q96T55 309 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 ARID3AQ99856 593 aa20.37■□□□□ 0.85
CIRBP-217ENST00000588230 FAM124BQ9H5Z6 455 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-217ENST00000588230 MYH10P35580 1976 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 GREB1Q4ZG55 1949 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 DENND4CQ5VZ89 1909 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 MBD3O95983 291 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 ERCC5P28715 1186 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-217ENST00000588230 ADORA2BP29275 332 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 GDI1P31150 447 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 USP46P62068 366 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 YWHAEP62258 255 aaKnown RBP20.36■□□□□ 0.85
CIRBP-217ENST00000588230 IFRD2Q12894 506 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-217ENST00000588230 CUL2Q13617 745 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 ALYREFQ86V81 257 aaKnown RBP20.36■□□□□ 0.85
CIRBP-217ENST00000588230 NUP93Q8N1F7 819 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 DTWD2Q8NBA8 298 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 PJA1Q8NG27 643 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 CYFIP2Q96F07 1278 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 SHDQ96IW2 340 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 CNOT6LQ96LI5 555 aaKnown RBP20.36■□□□□ 0.85
CIRBP-217ENST00000588230 HEXIM2Q96MH2 286 aaKnown RBP20.36■□□□□ 0.85
CIRBP-217ENST00000588230 NT5C1BQ96P26 610 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 HNRNPABQ99729 332 aaKnown RBP20.36■□□□□ 0.85
CIRBP-217ENST00000588230 TTLL2Q9BWV7 592 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 TRPC7Q9HCX4 862 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 TRPM5Q9NZQ8 1165 aa20.36■□□□□ 0.85
CIRBP-217ENST00000588230 NUP210Q8TEM1 1887 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 ZFHX2Q9C0A1 2572 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 ARNTLO00327 626 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 ZNF263O14978 683 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 TADA3O75528 432 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 RTN3O95197 1032 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 TBXAS1P24557 533 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 MRE11P49959 708 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 PRKCQQ04759 706 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 CELF5Q8N6W0 485 aaKnown RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 IRF7Q92985 503 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 LRRC3BQ96PB8 259 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 SLITRK1Q96PX8 696 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 SMG9Q9H0W8 520 aaKnown RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 OBP2AQ9NY56 170 aa20.35■□□□□ 0.85
CIRBP-217ENST00000588230 MTF2Q9Y483 593 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 ZNF638Q14966 1978 aaKnown RBP20.35■□□□□ 0.85
CIRBP-217ENST00000588230 TRAV19A0A0A6YYK7 116 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 PRAMEF12O95522 483 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 DCNP07585 359 aaKnown RBP20.34■□□□□ 0.85
CIRBP-217ENST00000588230 FAM200BP0CF97 657 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 YWHAQP27348 245 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 PPP3CCP48454 512 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 MAP3K7CLP57077 242 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 EHBP1Q8NDI1 1231 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 DNASE1L2Q92874 299 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 TMEM176AQ96HP8 235 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 SMOQ99835 787 aa20.34■□□□□ 0.85
CIRBP-217ENST00000588230 HEBP1Q9NRV9 189 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms