RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	TYROBP	O43914	113 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	B4GALT4	O60513	344 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	AGT	P01019	485 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	CDKN2B	P42772	138 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	SERPINB4	P48594	390 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	SLC29A2	Q14542	456 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	C6orf163	Q5TEZ5	329 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	CHST13	Q8NET6	341 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	EXD1	Q8NHP7	514 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	CCDC110	Q8TBZ0	833 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	ZBTB45	Q96K62	511 aa	Predicted RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	DHRS1	Q96LJ7	313 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	GPR20	Q99678	358 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	RAB17	Q9H0T7	212 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	LHX5	Q9H2C1	402 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	NRBP2	Q9NSY0	501 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	IL1RAPL1	Q9NZN1	696 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	FBXO9	Q9UK97	447 aa	Predicted RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	PRELID1	Q9Y255	219 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	MTTP	P55157	894 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	DNAJC9	Q8WXX5	260 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	TFAP2B	Q92481	460 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	TRPV5	Q9NQA5	729 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	DOCK4	Q8N1I0	1966 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	LSM8	O95777	96 aa	Known RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	CREB1	P16220	341 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	TMOD1	P28289	359 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	HOXC8	P31273	242 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	TMEM259	Q4ZIN3	620 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	ZNF394	Q53GI3	561 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	STMN2	Q93045	179 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	NT5C1B	Q96P26	610 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	PI4K2A	Q9BTU6	479 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	TEX13B	Q9BXU2	312 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	FBXO40	Q9UH90	709 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	DRG1	Q9Y295	367 aa	Known RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	CASP8AP2	Q9UKL3	1982 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	hCG_2014768	A0A024R1R8	64 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	HLA-DRA	P01903	254 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	RFC5	P40937	340 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	INCA1	Q0VD86	236 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	ITIH4	Q14624	930 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	KPNB1	Q14974	876 aa	Known RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	ANGEL2	Q5VTE6	544 aa	Known RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	FAAH2	Q6GMR7	532 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	GADL1	Q6ZQY3	521 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	PLPPR4	Q7Z2D5	763 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	WDR49	Q8IV35	697 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	C7orf31	Q8N865	590 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	FAF2	Q96CS3	445 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	DDX23	Q9BUQ8	820 aa	Known RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	UBN1	Q9NPG3	1134 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	CLEC11A	Q9Y240	323 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	GOLGA8IP	A6NC78	632 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928		A6NHS1	94 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	GOLGA8J	A6NMD2	632 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	NOP56	O00567	594 aa	Known RBP	11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	BIRC5	O15392	142 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	ATP5H	O75947	161 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	SUN1	O94901	812 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	LINGO3	P0C6S8	592 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	TNNI1	P19237	187 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	TUBA4A	P68366	448 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	MBTD1	Q05BQ5	628 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	STXBP2	Q15833	593 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	SPDYA	Q5MJ70	313 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	DAB2IP	Q5VWQ8	1189 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	POLN	Q7Z5Q5	900 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	ZCCHC9	Q8N567	271 aa	Known RBP	11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	ALLC	Q8N6M5	410 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	SLC7A3	Q8WY07	619 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	XPO6	Q96QU8	1125 aa	Known RBP	11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	ADAM33	Q9BZ11	813 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	MTUS1	Q9ULD2	1270 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	DLAT	P10515	647 aa	Known RBP	11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	ACADS	P16219	412 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	RAD23B	P54727	409 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	CNTN2	Q02246	1040 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	DHX9	Q08211	1270 aa	Known RBP	11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	ACVR2B	Q13705	512 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	SEL1L2	Q5TEA6	688 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	SPOPL	Q6IQ16	392 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	ALKAL1	Q6UXT8	129 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	SSU72	Q9NP77	194 aa	Known RBP	11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	TXLNG	Q9NUQ3	528 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	CLUH	O75153	1309 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	SPOP	O43791	374 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	IL1B	P01584	269 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	CCNB1	P14635	433 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	NQO1	P15559	274 aa	Known RBP	11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	TNFSF9	P41273	254 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	CTC1	Q2NKJ3	1217 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	FAM160B1	Q5W0V3	765 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	TRIM72	Q6ZMU5	477 aa		11.42	□□□□□ -0.58
ILF3-208	ENST00000587928	VSIG1	Q86XK7	387 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms