RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 LYSMD4Q5XG99 296 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 CRELD2Q6UXH1 353 aaPredicted RBP19.44■□□□□ 0.7
TOP3A-220ENST00000585031 PDCL2Q8N4E4 241 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 HDDC3Q8N4P3 179 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 PNPLA1Q8N8W4 532 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 HMGB4Q8WW32 186 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 FIZ1Q96SL8 496 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 SCUBE2Q9NQ36 999 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 KCNG1Q9UIX4 513 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 GTF3C4Q9UKN8 822 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 L1RE1Q9UN81 338 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 KIR2DL1P43626 348 aaPredicted RBP19.43■□□□□ 0.7
TOP3A-220ENST00000585031 ANAPC15P60006 121 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 ADGRG2Q8IZP9 1017 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 MINDY1Q8N5J2 469 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 WHAMMQ8TF30 809 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 LEO1Q8WVC0 666 aaPredicted RBP19.43■□□□□ 0.7
TOP3A-220ENST00000585031 REEP2Q9BRK0 252 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 RAB34Q9BZG1 259 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 ASB7Q9H672 318 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 LARSQ9P2J5 1176 aaKnown RBP19.43■□□□□ 0.7
TOP3A-220ENST00000585031 UXTQ9UBK9 157 aaPredicted RBP19.43■□□□□ 0.7
TOP3A-220ENST00000585031 ARHGAP26Q9UNA1 814 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 C2CD2Q9Y426 696 aa19.43■□□□□ 0.7
TOP3A-220ENST00000585031 LEFTY2O00292 366 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 OPHN1O60890 802 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 NFATC1O95644 943 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 SERPINF2P08697 491 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 HDCP19113 662 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 NFE2Q16621 373 aaPredicted RBP19.42■□□□□ 0.7
TOP3A-220ENST00000585031 DUOXA1Q1HG43 343 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 FILIP1Q7Z7B0 1213 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 CCDC83Q8IWF9 413 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 ZSWIM2Q8NEG5 633 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 CEP76Q8TAP6 659 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 MDM1Q8TC05 714 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 RNF38Q9H0F5 515 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 HCN2Q9UL51 889 aa19.42■□□□□ 0.7
TOP3A-220ENST00000585031 A0A0A0MRY4 1105 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 EIF4E1BA6NMX2 242 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 SH3BP5O60239 455 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 GJB3O75712 270 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 ALDH1A2O94788 518 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 PRPHP41219 470 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 NEK4P51957 841 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 ATXN3P54252 364 aaPredicted RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 USP46P62068 366 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 RPL10AP62906 217 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 TSPY1Q01534 308 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 GFPT1Q06210 699 aaPredicted RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 DHCR24Q15392 516 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 TRIP6Q15654 476 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 INTS6LQ5JSJ4 861 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 RHBDF2Q6PJF5 856 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 DTHD1Q6ZMT9 781 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 PHTF2Q8N3S3 785 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 CXorf38Q8TB03 319 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 LRIG1Q96JA1 1093 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 SPACA7Q96KW9 195 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 ACBD6Q9BR61 282 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 ABCB6Q9NP58 842 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 DNAAF2Q9NVR5 837 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 DDX43Q9NXZ2 648 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 NOL7Q9UMY1 257 aaKnown RBP19.41■□□□□ 0.7
TOP3A-220ENST00000585031 RAXQ9Y2V3 346 aa19.41■□□□□ 0.7
TOP3A-220ENST00000585031 TCRBV21S2A2A0A5A6 115 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 H0YCG3 227 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 K7ENM7 598 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 KAT7O95251 611 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 ATP2C1P98194 919 aaPredicted RBP19.4■□□□□ 0.7
TOP3A-220ENST00000585031 SV2CQ496J9 727 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 SLC41A1Q8IVJ1 513 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 SCN4BQ8IWT1 228 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 MYCT1Q8N699 235 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 PNKPQ96T60 521 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 BCCIPQ9P287 314 aaKnown RBP eCLIP19.4■□□□□ 0.7
TOP3A-220ENST00000585031 DKK4Q9UBT3 224 aa19.4■□□□□ 0.7
TOP3A-220ENST00000585031 GOLGA4Q13439 2230 aaKnown RBP19.4■□□□□ 0.7
TOP3A-220ENST00000585031 SHROOM3Q8TF72 1996 aa19.39■□□□□ 0.7
TOP3A-220ENST00000585031 ARHGAP33O14559 1287 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 ATP2C2O75185 946 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 ZNF131P52739 623 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 GTF2BQ00403 316 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 KDSRQ06136 332 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 SLC14A1Q13336 389 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 BYSLQ13895 437 aaKnown RBP19.39■□□□□ 0.69
TOP3A-220ENST00000585031 KCNB1Q14721 858 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 LMBRD2Q68DH5 695 aaPredicted RBP19.39■□□□□ 0.69
TOP3A-220ENST00000585031 ADALQ6DHV7 355 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 SLCO6A1Q86UG4 719 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 POLMQ9NP87 494 aaPredicted RBP19.39■□□□□ 0.69
TOP3A-220ENST00000585031 KCND2Q9NZV8 630 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 STYXL1Q9Y6J8 313 aa19.39■□□□□ 0.69
TOP3A-220ENST00000585031 FTH1P19P0C7X4 201 aa19.38■□□□□ 0.69
TOP3A-220ENST00000585031 GABRG2P18507 467 aa19.38■□□□□ 0.69
TOP3A-220ENST00000585031 ADSSP30520 456 aa19.38■□□□□ 0.69
TOP3A-220ENST00000585031 POLR2BP30876 1174 aaKnown RBP19.38■□□□□ 0.69
TOP3A-220ENST00000585031 RPL6Q02878 288 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms