RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 MYLPFQ96A32 169 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 ITGA11Q9UKX5 1188 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 C2orf78A6NCI8 922 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 ANTXRLA6NF34 631 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 AXIN1O15169 862 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 RPP40O75818 363 aaKnown RBP16.74■□□□□ 0.27
SKA2-209ENST00000583976 KRT37O76014 449 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 CKMP06732 381 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 ADRB1P08588 477 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 GARTP22102 1010 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 HOXA6P31267 233 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 MYL7Q01449 175 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 GRSF1Q12849 480 aaKnown RBP eCLIP16.74■□□□□ 0.27
SKA2-209ENST00000583976 KNOP1Q1ED39 458 aaKnown RBP16.74■□□□□ 0.27
SKA2-209ENST00000583976 SOWAHAQ2M3V2 549 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 CBWD2Q8IUF1 395 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 SCN4BQ8IWT1 228 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 SPATA20Q8TB22 786 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 KBTBD7Q8WVZ9 684 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 CYP2S1Q96SQ9 504 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 ACBD6Q9BR61 282 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 ARRDC1-AS1Q9H2J1 176 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 ABCB6Q9NP58 842 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 MAN1B1Q9UKM7 699 aa16.74■□□□□ 0.27
SKA2-209ENST00000583976 CNOT1A5YKK6 2376 aaKnown RBP16.74■□□□□ 0.27
SKA2-209ENST00000583976 UBE4BO95155 1302 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 USP24Q9UPU5 2620 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 TRDMT1O14717 391 aaKnown RBP16.73■□□□□ 0.27
SKA2-209ENST00000583976 GABRDO14764 452 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 CLIC2O15247 247 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 TGFB1I1O43294 461 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 EPN2O95208 641 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 GJA4P35212 333 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 ZNF268Q14587 947 aaPredicted RBP16.73■□□□□ 0.27
SKA2-209ENST00000583976 BMT2Q1RMZ1 405 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 AASDHQ4L235 1098 aaPredicted RBP16.73■□□□□ 0.27
SKA2-209ENST00000583976 TCEAL6Q6IPX3 200 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 CC2D1AQ6P1N0 951 aaPredicted RBP16.73■□□□□ 0.27
SKA2-209ENST00000583976 SPATA2LQ8IUW3 424 aaPredicted RBP16.73■□□□□ 0.27
SKA2-209ENST00000583976 TMEM86AQ8N2M4 240 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 RPLP0P6Q8NHW5 317 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 TCEAL3Q969E4 200 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 TRMT2BQ96GJ1 504 aaKnown RBP16.73■□□□□ 0.27
SKA2-209ENST00000583976 SYT15Q9BQS2 421 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 NUP62CLQ9H1M0 184 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 CRTAC1Q9NQ79 661 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 GDAP2Q9NXN4 497 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 ZMYM5Q9UJ78 669 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 SLC8A2Q9UPR5 921 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 NME7Q9Y5B8 376 aa16.73■□□□□ 0.27
SKA2-209ENST00000583976 FRYQ5TBA9 3013 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 TRAV19A0A0A6YYK7 116 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
SKA2-209ENST00000583976 CCDC192P0DO97 292 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 LMO2P25791 158 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 USP46P62068 366 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
SKA2-209ENST00000583976 PDGFRLQ15198 375 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 EML3Q32P44 896 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 CFAP221Q4G0U5 840 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 ZNF658Q5TYW1 1059 aaPredicted RBP16.72■□□□□ 0.27
SKA2-209ENST00000583976 GPD1LQ8N335 351 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 CPA6Q8N4T0 437 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 TOP6BLQ8N6T0 577 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 ARL14EPQ8N8R7 260 aaPredicted RBP16.72■□□□□ 0.27
SKA2-209ENST00000583976 MYRFLQ96LU7 910 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 P2RY13Q9BPV8 354 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 AGPAT3Q9NRZ7 376 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 DUS2Q9NX74 493 aaKnown RBP16.72■□□□□ 0.27
SKA2-209ENST00000583976 GCNT4Q9P109 453 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 UXTQ9UBK9 157 aaPredicted RBP16.72■□□□□ 0.27
SKA2-209ENST00000583976 CFAP47Q6ZTR5 3102 aa16.72■□□□□ 0.27
SKA2-209ENST00000583976 DCLK1O15075 740 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 KIF20AO95235 890 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 RAP1GAPP47736 663 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 IFNAR2P48551 515 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 GALK1P51570 392 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 RBP5P82980 135 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 ZXDBP98169 803 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 HS2ST1Q7LGA3 356 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 SH3RF2Q8TEC5 729 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
SKA2-209ENST00000583976 OSCP1Q8WVF1 389 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 KIAA1468Q9P260 1216 aa16.71■□□□□ 0.27
SKA2-209ENST00000583976 MBD3O95983 291 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 LDHAP00338 332 aaKnown RBP16.7■□□□□ 0.26
SKA2-209ENST00000583976 BDNFP23560 247 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 PCSK1P29120 753 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 MPLP40238 635 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 PRCPP42785 496 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 CYP2J2P51589 502 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 FAM171BQ6P995 826 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
SKA2-209ENST00000583976 C12orf50Q8NA57 414 aaPredicted RBP16.7■□□□□ 0.26
SKA2-209ENST00000583976 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms