RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 CRTAC1Q9NQ79 661 aa9.72□□□□□ -0.85
CASC3-209ENST00000583902 RRN3Q9NYV6 651 aa9.72□□□□□ -0.85
CASC3-209ENST00000583902 AFF4Q9UHB7 1163 aaKnown RBP9.72□□□□□ -0.85
CASC3-209ENST00000583902 REXO2Q9Y3B8 237 aaKnown RBP9.72□□□□□ -0.85
CASC3-209ENST00000583902 JRKLQ9Y4A0 524 aa9.72□□□□□ -0.85
CASC3-209ENST00000583902 PCDHGC5Q9Y5F6 944 aa9.72□□□□□ -0.85
CASC3-209ENST00000583902 BRCA2P51587 3418 aa9.72□□□□□ -0.85
CASC3-209ENST00000583902 PATJQ8NI35 1801 aa9.71□□□□□ -0.85
CASC3-209ENST00000583902 MYBPHLA2RUH7 354 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 LINC01553A4QN01 128 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 MYO1FO00160 1098 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 AP1G2O75843 785 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 ABLIM3O94929 683 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 RTN3O95197 1032 aaPredicted RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 ADH1AP07327 375 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 LINC00271P0C7V0 271 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 HOXB3P14651 431 aaPredicted RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 MAN1A1P33908 653 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 PPP3CCP48454 512 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 NAP1L1P55209 391 aaKnown RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 ERVK-21P61565 698 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 MTA1Q13330 715 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 PIGHQ14442 188 aaPredicted RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 SMC1AQ14683 1233 aaKnown RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 CLUL1Q15846 466 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 RAB41Q5JT25 222 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 C11orf63Q6NUN7 778 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 FAM35AQ86V20 835 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 CEP57Q86XR8 500 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 OR10T2Q8NGX3 314 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 HDAC7Q8WUI4 952 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 CPA5Q8WXQ8 436 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 RIN2Q8WYP3 895 aaPredicted RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 GOLGA1Q92805 767 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 MCRS1Q96EZ8 462 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 B3GNT5Q9BYG0 378 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 ZBP1Q9H171 429 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 DPEP3Q9H4B8 488 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 LRRC4Q9HBW1 653 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 ACP6Q9NPH0 428 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 LZTFL1Q9NQ48 299 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 FAM49BQ9NUQ9 324 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 CTTNBP2NLQ9P2B4 639 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 CNOT8Q9UFF9 292 aaKnown RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 IP6K2Q9UHH9 426 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 GUCA1BQ9UMX6 200 aa9.71□□□□□ -0.86
CASC3-209ENST00000583902 TIMM13Q9Y5L4 95 aaPredicted RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 MTCL1Q9Y4B5 1905 aaKnown RBP9.71□□□□□ -0.86
CASC3-209ENST00000583902 TMEM265A0A087WTH1 108 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 NT5C1B-RDH14C9J2C7 533 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 I3L4J1 428 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 LILRB3O75022 631 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 KRT3P12035 628 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 CPB1P15086 417 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 ATF2P15336 505 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 PRLRP16471 622 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 ACAT1P24752 427 aaKnown RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 ADORA2BP29275 332 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 CTNNB1P35222 781 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 NOP2P46087 812 aaKnown RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 SMAD3P84022 425 aaKnown RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 SLC6A3Q01959 620 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 PDE4CQ08493 712 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 MAMLD1Q13495 774 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 SHHQ15465 462 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 RTP2Q5QGT7 225 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 DENND1BQ6P3S1 775 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 DNAJC24Q6P3W2 148 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 CLEC20AQ6ZU45 233 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 CCDC149Q6ZUS6 474 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 PAQR9Q6ZVX9 377 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 SLC26A9Q7LBE3 791 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 TTC30AQ86WT1 665 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 PALB2Q86YC2 1186 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 TCEAL8Q8IYN2 117 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 TDHQ8IZJ6 230 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 SIX6OS1Q8N1H7 587 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 ZNF276Q8N554 614 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 WDTC1Q8N5D0 677 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 NIPA2Q8N8Q9 360 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 KLHL23Q8NBE8 558 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 KIF18AQ8NI77 898 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 SLC35G2Q8TBE7 412 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 FEZF2Q8TBJ5 459 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 ZNF564Q8TBZ8 553 aaPredicted RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 OVCA2Q8WZ82 227 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 PPP2R3CQ969Q6 453 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 MYLPFQ96A32 169 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 CPXM1Q96SM3 734 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 CDK5RAP1Q96SZ6 601 aaKnown RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 C11orf70Q9BRQ4 267 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 SELENOOQ9BVL4 669 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 LACRTQ9GZZ8 138 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 THAP2Q9H0W7 228 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 TLR9Q9NR96 1032 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 ST7Q9NRC1 585 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms