RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 UBXN6Q9BZV1 441 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ENTPD7Q9NQZ7 604 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PYCARDQ9ULZ3 195 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PCDHB5Q9Y5E4 795 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PCDHA13Q9Y5I0 950 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ADGRG1Q9Y653 693 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ATP8B3O60423 1300 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 WDR27A2RRH5 827 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MTMR11A4FU01 709 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 C2orf71A6NGG8 1288 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 AP1G2O75843 785 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 BEST1O76090 585 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CNPP09543 421 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FAM200BP0CF97 657 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NPR3P17342 541 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CYP2F1P24903 491 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 BCAT1P54687 386 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 KRT83P78385 493 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 BST2Q10589 180 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TPGS2Q68CL5 300 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PPP1R2P3Q6NXS1 205 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CLEC20AQ6ZU45 233 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 DNAAF5Q86Y56 855 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PHF13Q86YI8 300 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ATAD1Q8NBU5 361 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 C1orf131Q8NDD1 294 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ACRBPQ8NEB7 543 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SPPL2BQ8TCT7 592 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MICAL1Q8TDZ2 1067 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 STK32AQ8WU08 396 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SMARCD1Q96GM5 515 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PGLYRP2Q96PD5 576 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SMOQ99835 787 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 DESI2Q9BSY9 194 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 LMAN2LQ9H0V9 348 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CSNK1G1Q9HCP0 422 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ABCB6Q9NP58 842 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 LMCD1Q9NZU5 365 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 AFF4Q9UHB7 1163 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CYTH4Q9UIA0 394 aa17.28■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 HIDE1A8MVS5 230 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TULP2O00295 520 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 XPO1O14980 1071 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 IRS1P35568 1242 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MAGEA11P43364 429 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 RPL34P49207 117 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NDUFV1P49821 464 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CACNA2D1P54289 1103 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MAP3K7CLP57077 242 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SLC8A3P57103 927 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PLPP4Q5VZY2 271 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PMF1Q6P1K2 205 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 VSTM1Q6UX27 236 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ERICH1Q86X53 443 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ZMIZ2Q8NF64 920 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 HSFY1Q96LI6 401 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 KCNK16Q96T55 309 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 EMILIN2Q9BXX0 1053 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SLC4A5Q9BY07 1137 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 RHOBTB2Q9BYZ6 727 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CD320Q9NPF0 282 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 C11orf16Q9NQ32 467 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 KRT82Q9NSB4 513 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TMEM30AQ9NV96 361 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ABI2Q9NYB9 513 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MAFFQ9ULX9 164 aa17.27■□□□□ 0.36
CDK5RAP3-228ENST00000583363 IPO7O95373 1038 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 H2AFZP0C0S5 128 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 HAPLN1P10915 354 aaPredicted RBP17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ATF2P15336 505 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MMP8P22894 467 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CA8P35219 290 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 NSFP46459 744 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PLA2G4AP47712 749 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GALCP54803 685 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ADCY1Q08828 1119 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PTP4A2Q12974 167 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 DUSP4Q13115 394 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TMEM31Q5JXX7 168 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 LILRA6Q6PI73 481 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 H2AFVQ71UI9 128 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TMEM110Q86TL2 294 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PIGZQ86VD9 579 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MCOLN2Q8IZK6 566 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 KCTD13Q8WZ19 329 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 VCPIP1Q96JH7 1222 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PPP1R13BQ96KQ4 1090 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 NOX5Q96PH1 765 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CRISPLD1Q9H336 500 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ADAM22Q9P0K1 906 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 HSFX1Q9UBD0 423 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 INTUQ9ULD6 942 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SLC27A5Q9Y2P5 690 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PCDHGC5Q9Y5F6 944 aa17.26■□□□□ 0.35
CDK5RAP3-228ENST00000583363 FAM170AA1A519 330 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ANKRD62A6NC57 917 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 HHLA1C9JL84 531 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GABBR2O75899 941 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SEC24AO95486 1093 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms