RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 KBTBD6Q86V97 674 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TMEM86AQ8N2M4 240 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CPA6Q8N4T0 437 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CAMKK1Q8N5S9 505 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 LRRC52Q8N7C0 313 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 STKLD1Q8NE28 680 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SAAL1Q96ER3 474 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TRIM9Q9C026 710 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 IKZF4Q9H2S9 585 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TRPC7Q9HCX4 862 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 RRAGDQ9NQL2 400 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 DDX43Q9NXZ2 648 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 L1RE1Q9UN81 338 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PCDHGA5Q9Y5G8 931 aa10.39□□□□□ -0.75
CDK5RAP3-227ENST00000583352 OBSL1O75147 1896 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 NCOR2Q9Y618 2525 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TRAV19A0A0A6YYK7 116 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 MYMKA6NI61 221 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 GCNT3O95395 438 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 KRT19P08727 400 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 USP17L7P0C7H9 530 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 GARTP22102 1010 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ACAT1P24752 427 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CYP2F1P24903 491 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PCSK1P29120 753 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 GJA4P35212 333 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 RAP1GAPP47736 663 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 IFNAR2P48551 515 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 GALK1P51570 392 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TPM4P67936 248 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 RBP5P82980 135 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 FANCCQ00597 558 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CCDC6Q16204 474 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ZSCAN30Q86W11 494 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SPATA2LQ8IUW3 424 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SYCP3Q8IZU3 236 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CSGALNACT2Q8N6G5 542 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TOP6BLQ8N6T0 577 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 C1orf127Q8N9H9 656 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TTC16Q8NEE8 873 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 RIN3Q8TB24 985 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SPATA18Q8TC71 538 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 OSCP1Q8WVF1 389 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CD101Q93033 1021 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ACDQ96AP0 544 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CHFRQ96EP1 664 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TRMT2BQ96GJ1 504 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 MYRFLQ96LU7 910 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 HHIPQ96QV1 700 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 STRA6Q9BX79 667 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TMEM206Q9H813 350 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ECT2Q9H8V3 914 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 DUS2Q9NX74 493 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 RBAKQ9NYW8 714 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TBC1D7Q9P0N9 293 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ITGA11Q9UKX5 1188 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PCDHB13Q9Y5F0 798 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SNX9Q9Y5X1 595 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 DCHS1Q96JQ0 3298 aa10.38□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PVALEFA0A1B0GWK0 134 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 GOLGA8IPA6NC78 632 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 GOLGA8JA6NMD2 632 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TADA3O75528 432 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PTMAP06454 111 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CKMP06732 381 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TPM3P06753 285 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 TMEM191BP0C7N4 346 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ATP1A3P13637 1013 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 IDEP14735 1019 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 MPLP40238 635 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PRCPP42785 496 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 LHX1P48742 406 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 WNT7BP56706 349 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 KCNA1Q09470 495 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 USP4Q13107 963 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 NR1H3Q13133 447 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PSMD2Q13200 908 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ALCAMQ13740 583 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ELF2Q15723 593 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ZNF77Q15935 545 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PLK5Q496M5 336 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CFAP221Q4G0U5 840 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 COBLL1Q53SF7 1204 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 PLA2G2CQ5R387 149 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 STPG1Q5TH74 334 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SYT13Q7L8C5 426 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 OSTM1Q86WC4 334 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SCN4BQ8IWT1 228 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SMYD4Q8IYR2 804 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ADGRF2Q8IZF7 708 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 SPC24Q8NBT2 197 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ZSWIM2Q8NEG5 633 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 RPLP0P6Q8NHW5 317 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 CCDC26Q8TAB7 109 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 NOC3LQ8WTT2 800 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ATP2A3Q93084 1043 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 DNAJC19Q96DA6 116 aa10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 FUBP3Q96I24 572 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDK5RAP3-227ENST00000583352 ZC3H10Q96K80 434 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms