RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 KCNK16Q96T55 309 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 SLC46A2Q9BY10 475 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 SMG9Q9H0W8 520 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 BRD9Q9H8M2 597 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 ARHGEF3Q9NR81 526 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 ZMYM5Q9UJ78 669 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 KRBA1A5PL33 1030 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 PRAMEF12O95522 483 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 ABL1P00519 1130 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 FAM200BP0CF97 657 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 PSMC3P17980 439 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 COL9A1P20849 921 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 TBXAS1P24557 533 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 GDI1P31150 447 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 MAP3K7CLP57077 242 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 PFKPQ01813 784 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 CCDC183Q5T5S1 534 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 SASS6Q6UVJ0 657 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 RBM43Q6ZSC3 357 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 MON1AQ86VX9 555 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 MFSD6LQ8IWD5 586 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 CMTM8Q8IZV2 173 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 NUP93Q8N1F7 819 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 PPM1KQ8N3J5 372 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 JAKMIP2Q96AA8 810 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 TMEM176AQ96HP8 235 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 HNRNPABQ99729 332 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 TTLL2Q9BWV7 592 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 FAM124BQ9H5Z6 455 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 TRPM5Q9NZQ8 1165 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 NCANO14594 1321 aa13.36□□□□□ -0.27
SMARCE1-218ENST00000582955 TRAV19A0A0A6YYK7 116 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 ZNF263O14978 683 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 BEST1O76090 585 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 CKMP06732 381 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 YWHAQP27348 245 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 SLC5A3P53794 718 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 RAD23BP54727 409 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 TAF10Q12962 218 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 HSP90AA4PQ58FG1 418 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 PPP1R26Q5T8A7 1209 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 IRF2BP1Q8IU81 584 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 SLC4A11Q8NBS3 891 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 EHBP1Q8NDI1 1231 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 TTC16Q8NEE8 873 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 SLITRK1Q96PX8 696 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 SMOQ99835 787 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 INTS2Q9H0H0 1204 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 GCNT4Q9P109 453 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 HCN4Q9Y3Q4 1203 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 OBSL1O75147 1896 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 NUP210Q8TEM1 1887 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 GREB1Q4ZG55 1949 aa13.35□□□□□ -0.27
SMARCE1-218ENST00000582955 C2orf78A6NCI8 922 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 CD19P15391 556 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 WEE1P30291 646 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 PPP3CCP48454 512 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 MLF2Q15773 248 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 STX1AQ16623 288 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 SLC44A4Q53GD3 710 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 CT47A1Q5JQC4 288 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 IER5LQ5T953 404 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 CLEC20AQ6ZU45 233 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 RRAGAQ7L523 313 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 ARHGEF19Q8IW93 802 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 CELF5Q8N6W0 485 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 ZMIZ2Q8NF64 920 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 SCAMP5Q8TAC9 235 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 BPIFB1Q8TDL5 484 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 DNASE1L2Q92874 299 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 IRF7Q92985 503 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 KAT5Q92993 513 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 SHDQ96IW2 340 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 CRACR2AQ9BSW2 395 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 TBC1D17Q9HA65 648 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 TDP1Q9NUW8 608 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 ANO10Q9NW15 660 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 RAPGEFL1Q9UHV5 662 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 PCDHB4Q9Y5E5 795 aa13.34□□□□□ -0.27
SMARCE1-218ENST00000582955 DENND4CQ5VZ89 1909 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 MYH10P35580 1976 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 SOBPA7XYQ1 873 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 TNFRSF10BO14763 440 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 USP17L7P0C7H9 530 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 NPR3P17342 541 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 HDCP19113 662 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 PDE6CP51160 858 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 FCHO2Q0JRZ9 810 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms