RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 A0A1W2PQC6 194 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 PRR19A6NJB7 356 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 LGALS16A8MUM7 142 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 AKR1B15C9JRZ8 316 aaPredicted RBP11.05□□□□□ -0.64
SS18-221ENST00000582448 H0YCG3 227 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 ZNF500O60304 480 aaPredicted RBP11.05□□□□□ -0.64
SS18-221ENST00000582448 HIP1RO75146 1068 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 MED26O95402 600 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 CTSAP10619 480 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 SKILP12757 684 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 PLS3P13797 630 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 DARSP14868 501 aaKnown RBP11.05□□□□□ -0.64
SS18-221ENST00000582448 SSTR4P31391 388 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 GPC3P51654 580 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 ZNF131P52739 623 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 PPP2R3AQ06190 1150 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 TDGQ13569 410 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 BMT2Q1RMZ1 405 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
SS18-221ENST00000582448 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 EXOC8Q8IYI6 725 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 SYCP3Q8IZU3 236 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 SHISA5Q8N114 240 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 DTWD2Q8NBA8 298 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 MCPH1Q8NEM0 835 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 SHKBP1Q8TBC3 707 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 SLC22A17Q8WUG5 538 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 SCFD1Q8WVM8 642 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 RIN2Q8WYP3 895 aaPredicted RBP11.05□□□□□ -0.64
SS18-221ENST00000582448 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 MRPL9Q9BYD2 267 aaKnown RBP11.05□□□□□ -0.64
SS18-221ENST00000582448 NRDE2Q9H7Z3 1164 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 TMEM206Q9H813 350 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 WRAP73Q9P2S5 460 aaPredicted RBP11.05□□□□□ -0.64
SS18-221ENST00000582448 MYO15AQ9UKN7 3530 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 EXOC7Q9UPT5 735 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 ITIH6Q6UXX5 1313 aa11.05□□□□□ -0.64
SS18-221ENST00000582448 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 K7ENM7 598 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 CCP110O43303 1012 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 NARSO43776 548 aaKnown RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 GALTP07902 379 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 AOC1P19801 751 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 SCP2P22307 547 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 PRKCEQ02156 737 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 ADAM9Q13443 819 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 UGCGQ16739 394 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 OTOP3Q7RTS5 596 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 DDX53Q86TM3 631 aaKnown RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 C3orf58Q8NDZ4 430 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 STK35Q8TDR2 534 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 CACTINQ8WUQ7 758 aaKnown RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 CCDC51Q96ER9 411 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 WDR89Q96FK6 387 aaPredicted RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 IGSF21Q96ID5 467 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 FAM167AQ96KS9 214 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 RTP3Q9BQQ7 232 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 NUP58Q9BVL2 599 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 CCDC86Q9H6F5 360 aaKnown RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 C17orf75Q9HAS0 396 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 KCNK12Q9HB15 430 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 METTL14Q9HCE5 456 aaKnown RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 RAD18Q9NS91 495 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 CGNQ9P2M7 1197 aaKnown RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 GPN3Q9UHW5 284 aaPredicted RBP11.04□□□□□ -0.64
SS18-221ENST00000582448 TRAF3IP3Q9Y228 551 aa11.04□□□□□ -0.64
SS18-221ENST00000582448 A0A087WZ62 844 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 SLC16A3O15427 465 aaKnown RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 ZNF862O60290 1169 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 PRPF6O94906 941 aaKnown RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 NR2F2P24468 414 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 POLGP54098 1239 aaPredicted RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 SNRPFP62306 86 aaKnown RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 DMP1Q13316 513 aaPredicted RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 DRP2Q13474 957 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 MTERF2Q49AM1 385 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 VWA3BQ502W6 1294 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 NOMO2Q5JPE7 1267 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 GLB1LQ6UWU2 654 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 ANO5Q75V66 913 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 MAEAQ7L5Y9 396 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 APTXQ7Z2E3 356 aaKnown RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 ZNF720Q7Z2F6 126 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 GPR149Q86SP6 731 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 IRF2BP1Q8IU81 584 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 CCDC105Q8IYK2 499 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 KIAA2013Q8IYS2 634 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 LINC01465Q8N7H1 131 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 ZNF397Q8NF99 534 aaPredicted RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms