RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TRAV19A0A0A6YYK7 116 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 TRIM49BA6NDI0 452 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 PSMA7O14818 248 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 SLC16A3O15427 465 aaKnown RBP20.73■□□□□ 0.91
SREBF1-220ENST00000581707 CCNE1P24864 410 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 MRE11P49959 708 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 KPNA1P52294 538 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-220ENST00000581707 USP46P62068 366 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 PLCB2Q00722 1185 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 CRYBG2Q8N1P7 616 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 FAM3CQ92520 227 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 CYP2S1Q96SQ9 504 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 KIF9Q9HAQ2 790 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 CYP3A43Q9HB55 503 aa20.73■□□□□ 0.91
SREBF1-220ENST00000581707 NDRG2Q9UN36 371 aaKnown RBP20.73■□□□□ 0.91
SREBF1-220ENST00000581707 USP17L7P0C7H9 530 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 CD44P16070 742 aaKnown RBP20.72■□□□□ 0.91
SREBF1-220ENST00000581707 ANP32AP39687 249 aaKnown RBP20.72■□□□□ 0.91
SREBF1-220ENST00000581707 PPP1R2P41236 205 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 MXI1P50539 228 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 UBE2HP62256 183 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 ORC1Q13415 861 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 ZNF268Q14587 947 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-220ENST00000581707 TCERG1LQ5VWI1 586 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 PAQR9Q6ZVX9 377 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 FAM35AQ86V20 835 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 C1orf210Q8IVY1 113 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 CLDN23Q96B33 292 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 NIF3L1Q9GZT8 377 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 C8orf33Q9H7E9 229 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-220ENST00000581707 GKN1Q9NS71 199 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 GTSE1Q9NYZ3 720 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 TRPM5Q9NZQ8 1165 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 HMGXB4Q9UGU5 601 aa20.72■□□□□ 0.91
SREBF1-220ENST00000581707 C2orf78A6NCI8 922 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 CKMP06732 381 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 TRIM21P19474 475 aaKnown RBP20.71■□□□□ 0.91
SREBF1-220ENST00000581707 BMP6P22004 513 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 MAGEA9P43362 315 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 PPP3CCP48454 512 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 INCA1Q0VD86 236 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 FZD5Q13467 585 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 DCAF17Q5H9S7 520 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-220ENST00000581707 FUKQ8N0W3 1084 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 NUP93Q8N1F7 819 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 ARL14EPQ8N8R7 260 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-220ENST00000581707 FBXL13Q8NEE6 735 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 TTC8Q8TAM2 541 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 SEMA4DQ92854 862 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 SMARCD1Q96GM5 515 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 MSANTD3Q96H12 275 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 SLC22A12Q96S37 553 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 KCNK16Q96T55 309 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 RAB20Q9NX57 234 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 GCNT4Q9P109 453 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 ARMCX3Q9UH62 379 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-220ENST00000581707 MYH10P35580 1976 aa20.71■□□□□ 0.91
SREBF1-220ENST00000581707 ZFHX2Q9C0A1 2572 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-220ENST00000581707 BIN1O00499 593 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 AP1G2O75843 785 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 CCDC130P13994 396 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 HDCP19113 662 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 RPS9P46781 194 aaKnown RBP20.7■□□□□ 0.9
SREBF1-220ENST00000581707 SOX9P48436 509 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 TNK2Q07912 1038 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 MORC3Q14149 939 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 KLHL10Q6JEL2 608 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 CC2D1AQ6P1N0 951 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-220ENST00000581707 C1orf228Q6PIY5 440 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 ZNF687Q8N1G0 1237 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 C12orf29Q8N999 325 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 SLC2A14Q8TDB8 520 aa20.7■□□□□ 0.9
SREBF1-220ENST00000581707 DMAP1Q9NPF5 467 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-220ENST00000581707 SPATA6Q9NWH7 488 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-220ENST00000581707 KIF26AQ9ULI4 1882 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-220ENST00000581707 ZNF840PA6NDX5 716 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 PPP1R3GB7ZBB8 358 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 RTN3O95197 1032 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-220ENST00000581707 PFKLP17858 780 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 CD58P19256 250 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 YWHAQP27348 245 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 PDE6CP51160 858 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 TAF10Q12962 218 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 ITPRIPL2Q3MIP1 535 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 WDR44Q5JSH3 913 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 RALGPS2Q86X27 583 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-220ENST00000581707 RIN3Q8TB24 985 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 FAXDC2Q96IV6 333 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 CEP63Q96MT8 703 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 SLITRK1Q96PX8 696 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 TWNKQ96RR1 684 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 FAM83CQ9BQN1 747 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 NT5C1AQ9BXI3 368 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 KRT82Q9NSB4 513 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 FAM49BQ9NUQ9 324 aa20.69■□□□□ 0.9
SREBF1-220ENST00000581707 SPECC1L-ADORA2AF8WAN1 911 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 CILPO75339 1184 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 ABL1P00519 1130 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 CTHP32929 405 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 NBL1P41271 181 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms