RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 PCSK1P29120 753 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 VAMP7P51809 220 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
TOP3A-211ENST00000581536 NLRP12P59046 1061 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 TNNC1P63316 161 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 PPP3CAQ08209 521 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 ORC1Q13415 861 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 VEPH1Q14D04 833 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 TAF12Q16514 161 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 ZACNQ401N2 412 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 TXNDC8Q6A555 127 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 ANKRD40Q6AI12 368 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 PHLDB3Q6NSJ2 640 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 SCARA5Q6ZMJ2 495 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 MAB21L3Q8N8X9 362 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 DTWD2Q8NBA8 298 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 MYCBPAPQ8TBZ2 947 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 ATOH1Q92858 354 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-211ENST00000581536 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 PCED1BQ96HM7 432 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 ZFYVE19Q96K21 471 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 B3GNT5Q9BYG0 378 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 GPR88Q9GZN0 384 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 MMRN2Q9H8L6 949 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 BRD9Q9H8M2 597 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 TRPV4Q9HBA0 871 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 DLGAP2Q9P1A6 1054 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 FRMD4BQ9Y2L6 1034 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 SIT1Q9Y3P8 196 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 HELZP42694 1942 aaKnown RBP10.35□□□□□ -0.75
TOP3A-211ENST00000581536 KANSL1LA0AUZ9 987 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 A8MXQ7 604 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 PRAMEF12O95522 483 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
TOP3A-211ENST00000581536 HLA-DRAP01903 254 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 PSMC3P17980 439 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 ATICP31939 592 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 GRIK1P39086 918 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 GCLMP48507 274 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 FZD5Q13467 585 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 NFIL3Q16649 462 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 ZNF699Q32M78 642 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 ZCWPW2Q504Y3 356 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 ZNF658Q5TYW1 1059 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-211ENST00000581536 TPRG1Q6ZUI0 275 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 PAQR9Q6ZVX9 377 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 FAM186BQ8IYM0 893 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 SPATA20Q8TB22 786 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 SPATA18Q8TC71 538 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-211ENST00000581536 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 SLC22A12Q96S37 553 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 DDX23Q9BUQ8 820 aaKnown RBP10.35□□□□□ -0.75
TOP3A-211ENST00000581536 TASP1Q9H6P5 420 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 MAP10Q9P2G4 905 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 CCL26Q9Y258 94 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 PATJQ8NI35 1801 aa10.35□□□□□ -0.75
TOP3A-211ENST00000581536 F5P12259 2224 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 TRIM49BA6NDI0 452 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 ARNTLO00327 626 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 IKBKBO14920 756 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 ZNF263O14978 683 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 TADA3O75528 432 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 NOL4O94818 638 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 CLSTN1O94985 981 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 KIF20AO95235 890 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 FAM163BP0C2L3 166 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 CSH1P0DML2 217 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 CSH2P0DML3 217 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 BMP6P22004 513 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 RFX1P22670 979 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 PSMC2P35998 433 aaKnown RBP10.34□□□□□ -0.75
TOP3A-211ENST00000581536 SOX9P48436 509 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 AP3M2P53677 418 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 RPL10AP62906 217 aaKnown RBP10.34□□□□□ -0.75
TOP3A-211ENST00000581536 PRKCQQ04759 706 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 TNK2Q07912 1038 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 UBXN2BQ14CS0 331 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 CFAP221Q4G0U5 840 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 ZNF667Q5HYK9 610 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 ACOT1Q86TX2 421 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 CCDC105Q8IYK2 499 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 CMTM8Q8IZV2 173 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 ARMC2Q8NEN0 867 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 PJA1Q8NG27 643 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 RIN3Q8TB24 985 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 TAS1R2Q8TE23 839 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 LRRN4Q8WUT4 740 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 SEMA4DQ92854 862 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 SMARCE1Q969G3 411 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 SHDQ96IW2 340 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 GSDMAQ96QA5 445 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 KCNK16Q96T55 309 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 PRRX2Q99811 253 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 ZNF518BQ9C0D4 1074 aa10.34□□□□□ -0.75
TOP3A-211ENST00000581536 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms