RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 CEP295NLQ96MC4 621 aa21.35■■□□□ 1.01
SS18-218ENST00000581021 HNRNPABQ99729 332 aaKnown RBP21.35■■□□□ 1.01
SS18-218ENST00000581021 DMAP1Q9NPF5 467 aaPredicted RBP21.35■■□□□ 1.01
SS18-218ENST00000581021 UXTQ9UBK9 157 aaPredicted RBP21.35■■□□□ 1.01
SS18-218ENST00000581021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.35■■□□□ 1.01
SS18-218ENST00000581021 PATJQ8NI35 1801 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 ANAPC1Q9H1A4 1944 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 SHISA7A6NL88 538 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 CCDC192P0DO97 292 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 PSMC3P17980 439 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 WEE1P30291 646 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 GPRIN1Q7Z2K8 1008 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 ARHGEF19Q8IW93 802 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 MFSD6LQ8IWD5 586 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 TMEM105Q8N8V8 129 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 MRPS31Q92665 395 aaKnown RBP21.34■■□□□ 1.01
SS18-218ENST00000581021 USP13Q92995 863 aaPredicted RBP21.34■■□□□ 1.01
SS18-218ENST00000581021 CYFIP2Q96F07 1278 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 CSNK1G1Q9HCP0 422 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 GCNT4Q9P109 453 aa21.34■■□□□ 1.01
SS18-218ENST00000581021 ATP8B3O60423 1300 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 KIF26AQ9ULI4 1882 aaPredicted RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 HHLA1C9JL84 531 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 P4HA2O15460 535 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 ACO1P21399 889 aaKnown RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 ERCC5P28715 1186 aaPredicted RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 GDI1P31150 447 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 PGFP49763 221 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 SLC5A3P53794 718 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 MAP3K7CLP57077 242 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 FCHO2Q0JRZ9 810 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 IFRD2Q12894 506 aaPredicted RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 TAF10Q12962 218 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 PPP1R26Q5T8A7 1209 aaPredicted RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 CLEC20AQ6ZU45 233 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 CYP2S1Q96SQ9 504 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 TRMT61BQ9BVS5 477 aaKnown RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 INTS2Q9H0H0 1204 aaKnown RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 IL37Q9NZH6 218 aa21.33■■□□□ 1.01
SS18-218ENST00000581021 ZNF638Q14966 1978 aaKnown RBP21.33■■□□□ 1.01
SS18-218ENST00000581021 ZNF840PA6NDX5 716 aa21.32■■□□□ 1
SS18-218ENST00000581021 PI15O43692 258 aa21.32■■□□□ 1
SS18-218ENST00000581021 FGFR1OPO95684 399 aaKnown RBP21.32■■□□□ 1
SS18-218ENST00000581021 DDX6P26196 483 aaKnown RBP eCLIP21.32■■□□□ 1
SS18-218ENST00000581021 APBA1Q02410 837 aa21.32■■□□□ 1
SS18-218ENST00000581021 HSP90AA4PQ58FG1 418 aa21.32■■□□□ 1
SS18-218ENST00000581021 C11orf57Q6ZUT1 292 aaPredicted RBP21.32■■□□□ 1
SS18-218ENST00000581021 NUP93Q8N1F7 819 aa21.32■■□□□ 1
SS18-218ENST00000581021 FLCNQ8NFG4 579 aa21.32■■□□□ 1
SS18-218ENST00000581021 DEPDC1BQ8WUY9 529 aa21.32■■□□□ 1
SS18-218ENST00000581021 TMEM176AQ96HP8 235 aa21.32■■□□□ 1
SS18-218ENST00000581021 ZFYVE19Q96K21 471 aa21.32■■□□□ 1
SS18-218ENST00000581021 KREMEN1Q96MU8 473 aa21.32■■□□□ 1
SS18-218ENST00000581021 NT5C1BQ96P26 610 aa21.32■■□□□ 1
SS18-218ENST00000581021 TBC1D17Q9HA65 648 aa21.32■■□□□ 1
SS18-218ENST00000581021 TRPC7Q9HCX4 862 aa21.32■■□□□ 1
SS18-218ENST00000581021 TMEM63CQ9P1W3 806 aa21.32■■□□□ 1
SS18-218ENST00000581021 MBD3O95983 291 aa21.31■■□□□ 1
SS18-218ENST00000581021 FAM200BP0CF97 657 aa21.31■■□□□ 1
SS18-218ENST00000581021 SLC44A4Q53GD3 710 aa21.31■■□□□ 1
SS18-218ENST00000581021 PHLDB3Q6NSJ2 640 aa21.31■■□□□ 1
SS18-218ENST00000581021 RRAGAQ7L523 313 aa21.31■■□□□ 1
SS18-218ENST00000581021 SUGP1Q8IWZ8 645 aaKnown RBP21.31■■□□□ 1
SS18-218ENST00000581021 EHBP1Q8NDI1 1231 aa21.31■■□□□ 1
SS18-218ENST00000581021 JAKMIP2Q96AA8 810 aa21.31■■□□□ 1
SS18-218ENST00000581021 HEXIM2Q96MH2 286 aaKnown RBP21.31■■□□□ 1
SS18-218ENST00000581021 FOXQ1Q9C009 403 aa21.31■■□□□ 1
SS18-218ENST00000581021 THAP9Q9H5L6 903 aa21.31■■□□□ 1
SS18-218ENST00000581021 FAM124BQ9H5Z6 455 aaPredicted RBP21.31■■□□□ 1
SS18-218ENST00000581021 BRD9Q9H8M2 597 aa21.31■■□□□ 1
SS18-218ENST00000581021 HEBP1Q9NRV9 189 aa21.31■■□□□ 1
SS18-218ENST00000581021 TICRRQ7Z2Z1 1910 aa21.31■■□□□ 1
SS18-218ENST00000581021 FAM92AA1XBS5 289 aa21.3■■□□□ 1
SS18-218ENST00000581021 CALCAP01258 141 aa21.3■■□□□ 1
SS18-218ENST00000581021 YWHAQP27348 245 aa21.3■■□□□ 1
SS18-218ENST00000581021 AVPR2P30518 371 aa21.3■■□□□ 1
SS18-218ENST00000581021 ZXDBP98169 803 aa21.3■■□□□ 1
SS18-218ENST00000581021 MLF2Q15773 248 aaPredicted RBP21.3■■□□□ 1
SS18-218ENST00000581021 ASTLQ6HA08 431 aaPredicted RBP21.3■■□□□ 1
SS18-218ENST00000581021 CREBRFQ8IUR6 639 aa21.3■■□□□ 1
SS18-218ENST00000581021 PPM1KQ8N3J5 372 aa21.3■■□□□ 1
SS18-218ENST00000581021 TTC39CQ8N584 583 aa21.3■■□□□ 1
SS18-218ENST00000581021 ARL14EPQ8N8R7 260 aaPredicted RBP21.3■■□□□ 1
SS18-218ENST00000581021 DNASE1L2Q92874 299 aa21.3■■□□□ 1
SS18-218ENST00000581021 E2F7Q96AV8 911 aa21.3■■□□□ 1
SS18-218ENST00000581021 ZSWIM1Q9BR11 485 aa21.3■■□□□ 1
SS18-218ENST00000581021 CRACR2AQ9BSW2 395 aa21.3■■□□□ 1
SS18-218ENST00000581021 DDX23Q9BUQ8 820 aaKnown RBP21.3■■□□□ 1
SS18-218ENST00000581021 MFSD1Q9H3U5 465 aa21.3■■□□□ 1
SS18-218ENST00000581021 SAMSN1Q9NSI8 373 aaKnown RBP21.3■■□□□ 1
SS18-218ENST00000581021 OBP2AQ9NY56 170 aa21.3■■□□□ 1
SS18-218ENST00000581021 DACH1Q9UI36 760 aa21.3■■□□□ 1
SS18-218ENST00000581021 TRAV19A0A0A6YYK7 116 aa21.29■■□□□ 1
SS18-218ENST00000581021 SOBPA7XYQ1 873 aa21.29■■□□□ 1
SS18-218ENST00000581021 RNF225M0QZC1 329 aaPredicted RBP21.29■■□□□ 1
SS18-218ENST00000581021 TBXAS1P24557 533 aaPredicted RBP21.29■■□□□ 1
SS18-218ENST00000581021 AVPR1AP37288 418 aa21.29■■□□□ 1
SS18-218ENST00000581021 PFKPQ01813 784 aa21.29■■□□□ 1
SS18-218ENST00000581021 MIIPQ5JXC2 388 aa21.29■■□□□ 1
SS18-218ENST00000581021 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms