RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ABLIM3O94929 683 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 SP9P0CG40 484 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 KRT5P13647 590 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 PTPN1P18031 435 aaKnown RBP12.88□□□□□ -0.35
CCDC84-209ENST00000580556 STAT1P42224 750 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 BPIFB4P59827 614 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 ROR1Q01973 937 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 STILQ15468 1287 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 CFAP221Q4G0U5 840 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 ARHGAP17Q68EM7 881 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 RSPO2Q6UXX9 243 aaPredicted RBP12.88□□□□□ -0.35
CCDC84-209ENST00000580556 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 OTOP3Q7RTS5 596 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 PPFIBP1Q86W92 1011 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 ST13P5Q8NFI4 369 aaPredicted RBP12.88□□□□□ -0.35
CCDC84-209ENST00000580556 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 RUBCNQ92622 972 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC84-209ENST00000580556 KLHL5Q96PQ7 755 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 CRTAC1Q9NQ79 661 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 SPTBN2O15020 2390 aa12.88□□□□□ -0.35
CCDC84-209ENST00000580556 WDR27A2RRH5 827 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 ADAM12O43184 909 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 HCRTO43612 131 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 PDGFRBP09619 1106 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 VDRP11473 427 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 CPB1P15086 417 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 ACAT1P24752 427 aaKnown RBP12.87□□□□□ -0.35
CCDC84-209ENST00000580556 OR1D2P34982 312 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 PSMC1P62191 440 aaKnown RBP12.87□□□□□ -0.35
CCDC84-209ENST00000580556 RTL10Q7L3V2 364 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 SUMF1Q8NBK3 374 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 AIPL1Q9NZN9 384 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 DLGAP2Q9P1A6 1054 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 IMPACTQ9P2X3 320 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 AFF4Q9UHB7 1163 aaKnown RBP12.87□□□□□ -0.35
CCDC84-209ENST00000580556 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
CCDC84-209ENST00000580556 GPR179Q6PRD1 2367 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 ATP8B3O60423 1300 aa12.87□□□□□ -0.35
CCDC84-209ENST00000580556 CACNA1IQ9P0X4 2223 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 COL4A3Q01955 1670 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 MYBPHLA2RUH7 354 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 MTMR11A4FU01 709 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 LRRC53A6NM62 1247 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
CCDC84-209ENST00000580556 MFAP3LO75121 409 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 ATP2C2O75185 946 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 GLUD1P00367 558 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 GLULP15104 373 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 ATF2P15336 505 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 FERP16591 822 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
CCDC84-209ENST00000580556 GNA15P30679 374 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 HNRNPH3P31942 346 aaKnown RBP12.86□□□□□ -0.35
CCDC84-209ENST00000580556 CASP14P31944 242 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 CLCN1P35523 988 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 USP8P40818 1118 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 MAGEA11P43364 429 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 CLCN4P51793 760 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 PTK2Q05397 1052 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 SLC39A12Q504Y0 691 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 ZNF394Q53GI3 561 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 SGO2Q562F6 1265 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 LRRTM3Q86VH5 581 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 ZNF677Q86XU0 584 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 MYLPFQ96A32 169 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 PCED1BQ96HM7 432 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 HEXIM2Q96MH2 286 aaKnown RBP12.86□□□□□ -0.35
CCDC84-209ENST00000580556 TMEM209Q96SK2 561 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 HNRNPABQ99729 332 aaKnown RBP12.86□□□□□ -0.35
CCDC84-209ENST00000580556 SFXN1Q9H9B4 322 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 WNT16Q9UBV4 365 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 DPP7Q9UHL4 492 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 GTF3C4Q9UKN8 822 aa12.86□□□□□ -0.35
CCDC84-209ENST00000580556 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 O00370 1275 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 CYP26A1O43174 497 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 MED7O43513 233 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 VNN2O95498 520 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 OR4Q2P0C623 313 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 PNMA6AP0CW24 399 aaPredicted RBP12.85□□□□□ -0.35
CCDC84-209ENST00000580556 CYP11B1P15538 503 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 KLRC2P26717 231 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 KRT9P35527 623 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 PRKCIP41743 596 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 PDE6CP51160 858 aa12.85□□□□□ -0.35
CCDC84-209ENST00000580556 ATXN1P54253 815 aaKnown RBP12.85□□□□□ -0.35
CCDC84-209ENST00000580556 ORC1Q13415 861 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms