RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 HEPACAM2A8MVW5 462 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 DPYSL4O14531 572 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 AP1G2O75843 785 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 AFPP02771 609 aaKnown RBP25.39■■□□□ 1.66
LIMD2-207ENST00000579329 PSMC3P17980 439 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 ERCC5P28715 1186 aaPredicted RBP25.39■■□□□ 1.66
LIMD2-207ENST00000579329 VCPP55072 806 aaKnown RBP25.39■■□□□ 1.66
LIMD2-207ENST00000579329 YWHAEP62258 255 aaKnown RBP25.39■■□□□ 1.66
LIMD2-207ENST00000579329 CUL2Q13617 745 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 MON1AQ86VX9 555 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 MFSD6LQ8IWD5 586 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 C12orf29Q8N999 325 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 ARHGEF3Q9NR81 526 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 FAM86C1Q9NVL1 165 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 OBP2AQ9NY56 170 aa25.39■■□□□ 1.66
LIMD2-207ENST00000579329 OBSL1O75147 1896 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 GREB1Q4ZG55 1949 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 TBXAS1P24557 533 aaPredicted RBP25.38■■□□□ 1.65
LIMD2-207ENST00000579329 USP46P62068 366 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 LRMPQ12912 555 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 RBM43Q6ZSC3 357 aaKnown RBP25.38■■□□□ 1.65
LIMD2-207ENST00000579329 CMTM8Q8IZV2 173 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 MAB21L3Q8N8X9 362 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 NT5C1BQ96P26 610 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 HNRNPABQ99729 332 aaKnown RBP25.38■■□□□ 1.65
LIMD2-207ENST00000579329 BRD9Q9H8M2 597 aa25.38■■□□□ 1.65
LIMD2-207ENST00000579329 NCANO14594 1321 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 DENND4CQ5VZ89 1909 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 KRBA1A5PL33 1030 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 RTN3O95197 1032 aaPredicted RBP25.37■■□□□ 1.65
LIMD2-207ENST00000579329 ADORA2BP29275 332 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 AVPR1AP37288 418 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 ZNF394Q53GI3 561 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 CT47A1Q5JQC4 288 aaPredicted RBP25.37■■□□□ 1.65
LIMD2-207ENST00000579329 TXNDC8Q6A555 127 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 YAF2Q8IY57 180 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 NUP93Q8N1F7 819 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 FLCNQ8NFG4 579 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 DNASE1L2Q92874 299 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 RSPRY1Q96DX4 576 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 CYFIP2Q96F07 1278 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 KCNK16Q96T55 309 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 TRPM5Q9NZQ8 1165 aa25.37■■□□□ 1.65
LIMD2-207ENST00000579329 PRAMEF12O95522 483 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 FAM200BP0CF97 657 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 RFX1P22670 979 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 GDI1P31150 447 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 PPP3CCP48454 512 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 CREBRFQ8IUR6 639 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 GPIHBP1Q8IV16 184 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 CELF5Q8N6W0 485 aaKnown RBP25.36■■□□□ 1.65
LIMD2-207ENST00000579329 IRF7Q92985 503 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 TMEM176AQ96HP8 235 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 SMOQ99835 787 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 THAP9Q9H5L6 903 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 KIF9Q9HAQ2 790 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 CSNK1G1Q9HCP0 422 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 TRPC7Q9HCX4 862 aa25.36■■□□□ 1.65
LIMD2-207ENST00000579329 ZNF263O14978 683 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 NPR3P17342 541 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 RAD23BP54727 409 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 IFRD2Q12894 506 aaPredicted RBP25.35■■□□□ 1.65
LIMD2-207ENST00000579329 MLF2Q15773 248 aaPredicted RBP25.35■■□□□ 1.65
LIMD2-207ENST00000579329 CWF19L1Q69YN2 538 aaKnown RBP25.35■■□□□ 1.65
LIMD2-207ENST00000579329 FAM114A1Q8IWE2 563 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 SLC4A11Q8NBS3 891 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 EHBP1Q8NDI1 1231 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 LMO3Q8TAP4 145 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 SHDQ96IW2 340 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 HEXIM2Q96MH2 286 aaKnown RBP25.35■■□□□ 1.65
LIMD2-207ENST00000579329 SLITRK1Q96PX8 696 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 SMG9Q9H0W8 520 aaKnown RBP25.35■■□□□ 1.65
LIMD2-207ENST00000579329 COMMD8Q9NX08 183 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 MYO15AQ9UKN7 3530 aa25.35■■□□□ 1.65
LIMD2-207ENST00000579329 SPTBN4Q9H254 2564 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 TRAV19A0A0A6YYK7 116 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 YWHAQP27348 245 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 AVPR2P30518 371 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 CLCN5P51795 746 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 SLC5A3P53794 718 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 MAP3K7CLP57077 242 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 PRKCQQ04759 706 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 FCHO2Q0JRZ9 810 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 TAF10Q12962 218 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 SLC44A4Q53GD3 710 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 ASTLQ6HA08 431 aaPredicted RBP25.34■■□□□ 1.65
LIMD2-207ENST00000579329 IRF2BP1Q8IU81 584 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 ZMIZ2Q8NF64 920 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 BPIFB1Q8TDL5 484 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 TBC1D17Q9HA65 648 aa25.34■■□□□ 1.65
LIMD2-207ENST00000579329 TNFRSF10BO14763 440 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 CHADO15335 359 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 GFRA3O60609 400 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 BEST1O76090 585 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 USP17L7P0C7H9 530 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 PFKLP17858 780 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 MTIF2P46199 727 aaKnown RBP25.33■■□□□ 1.65
LIMD2-207ENST00000579329 PDE6CP51160 858 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 ZNF268Q14587 947 aaPredicted RBP25.33■■□□□ 1.65
LIMD2-207ENST00000579329 CCDC183Q5T5S1 534 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms