RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 INSM2Q96T92 566 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 CHP1Q99653 195 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 PLVAPQ9BX97 442 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 IRX2Q9BZI1 471 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 GPR62Q9BZJ7 368 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 ELOVL4Q9GZR5 314 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 SNX25Q9H3E2 840 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 HAUS4Q9H6D7 363 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 ARHGAP20Q9P2F6 1191 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 RWDD3Q9Y3V2 267 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 PCDHA11Q9Y5I1 949 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 A8MXQ7 604 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 NT5C1B-RDH14C9J2C7 533 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 LCE2BO14633 110 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 ARHGAP6O43182 974 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 TBC1D4O60343 1298 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 PNMA6AP0CW24 399 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 VDRP11473 427 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 CD58P19256 250 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 LMO2P25791 158 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 BMPR1AP36894 532 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 USP8P40818 1118 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 RAP1GAPP47736 663 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 CDR2Q01850 454 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 MLLT1Q03111 559 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 KRT17Q04695 432 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 YWHAHQ04917 246 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 BMS1Q14692 1282 aaKnown RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 STILQ15468 1287 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 CNGA2Q16280 664 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 USP41Q3LFD5 358 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 SPOUT1Q5T280 376 aaKnown RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 FAM171A1Q5VUB5 890 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 FAM171BQ6P995 826 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 SCARA5Q6ZMJ2 495 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 ZNF571Q7Z3V5 609 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 DDX53Q86TM3 631 aaKnown RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 SLC47A2Q86VL8 602 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 TMEM173Q86WV6 379 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 THEM5Q8N1Q8 247 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 OR6B3Q8NGW1 331 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 SLC30A5Q8TAD4 765 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 ZNF606Q8WXB4 792 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 TMEM169Q96HH4 297 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 CCDC42Q96M95 316 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 SAMD11Q96NU1 681 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 PRO3102Q9H379 93 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 NHEJ1Q9H9Q4 299 aaPredicted RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 DDX43Q9NXZ2 648 aaKnown RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 NOCTQ9UK39 431 aaKnown RBP8.51□□□□□ -1.05
COPS3-215ENST00000578317 CDH9Q9ULB4 789 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 LZTS1Q9Y250 596 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 NME7Q9Y5B8 376 aa8.51□□□□□ -1.05
COPS3-215ENST00000578317 COL4A6Q14031 1691 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 LINC01553A4QN01 128 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 OR6C75A6NL08 312 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 C5orf67F2Z3F1 127 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 I3L4J1 428 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 AXIN1O15169 862 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 CLSTN1O94985 981 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 LCA5LO95447 670 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 SOD2P04179 222 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 GZMAP12544 262 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 SKILP12757 684 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 GNA15P30679 374 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 PDE6CP51160 858 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 CCZ1BP86790 482 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 CCZ1P86791 482 aaPredicted RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 DAB2P98082 770 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 ARID5AQ03989 594 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 UBE3AQ05086 875 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 MAPRE1Q15691 268 aaKnown RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 ZNF394Q53GI3 561 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 ARHGAP17Q68EM7 881 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 ALG1LQ6GMV1 187 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 OVOS1Q6IE37 1185 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 ANKS3Q6ZW76 656 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 NOP9Q86U38 636 aaKnown RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 VPS36Q86VN1 386 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 OSTM1Q86WC4 334 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 HASPINQ8TF76 798 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 BCL7CQ8WUZ0 217 aaPredicted RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 HEXIM2Q96MH2 286 aaKnown RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 FAM161BQ96MY7 647 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 TWNKQ96RR1 684 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 AGPAT1Q99943 283 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 RTP3Q9BQQ7 232 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 TTPALQ9BTX7 342 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 ZNF518BQ9C0D4 1074 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 LHX5Q9H2C1 402 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 TIMM13Q9Y5L4 95 aaPredicted RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 BACE2Q9Y5Z0 518 aa8.5□□□□□ -1.05
COPS3-215ENST00000578317 EPN1Q9Y6I3 576 aaPredicted RBP8.5□□□□□ -1.05
COPS3-215ENST00000578317 CHD9Q3L8U1 2897 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 CITO14578 2027 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 LCHNA4D1U4 455 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 EIF3CLB5ME19 914 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 H7C4K7 107 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 MED7O43513 233 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms