RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ALG3Q92685 438 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 CENPTQ96BT3 561 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 CACYBPQ9HB71 228 aaKnown RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 ARHGEF38Q9NXL2 777 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 PCYOX1Q9UHG3 505 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 SNX5Q9Y5X3 404 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 SYCE1LA8MT33 242 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 E5RI56 91 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 RGL2O15211 777 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 PTK6Q13882 451 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 MPZL3Q6UWV2 235 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 IPMKQ8NFU5 416 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 AFG1LQ8WV93 481 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 FGFBP2Q9BYJ0 223 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 SALL4Q9UJQ4 1053 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 C15orf41Q9Y2V0 281 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 DYNC1LI2O43237 492 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 AKAP10O43572 662 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 PSMD10O75832 226 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 NUDT2P50583 147 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ELF3P78545 371 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 ZNF235Q14590 738 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 PGM5Q15124 567 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ZBTB41Q5SVQ8 909 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 DENND5BQ6ZUT9 1274 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 OR6J1Q8NGC5 347 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ELMO2Q96JJ3 720 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 GEMIN8Q9NWZ8 242 aaKnown RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 DNAJC16Q9Y2G8 782 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 MRC1P22897 1456 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CYP3A7-CYP3A51PA0A087WV96 503 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 MAGEA13PA6NCF6 341 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 TGFB1I1O43294 461 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 SKAP2O75563 359 aaPredicted RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 GH1P01241 217 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CALCAP01258 141 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CD4P01730 458 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ZSCAN5DPP0CG00 497 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 TGM2P21980 687 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CYP3A7P24462 503 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 EPHB2P29323 1055 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 GNL1P36915 607 aaPredicted RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 RANBP1P43487 201 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 OCA2Q04671 838 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 FLOT2Q14254 428 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 PDK2Q15119 407 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 TBCCQ15814 346 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 GRAMD4Q6IC98 578 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 LAYNQ6UX15 382 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 SETD3Q86TU7 594 aaPredicted RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 WDR49Q8IV35 697 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 MAP4K3Q8IVH8 894 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ATPAF2Q8N5M1 289 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 MKL1Q969V6 931 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 RMDN1Q96DB5 314 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 ILKAPQ9H0C8 392 aaPredicted RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 CCDC134Q9H6E4 229 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 GGA2Q9UJY4 613 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 NUDT17P0C025 328 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 SPATA31C1P0DKV0 1188 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CYP2C8P10632 490 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ATP6V1B1P15313 513 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 KCNA2P16389 499 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ADRA1DP25100 572 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 BACE1P56817 501 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 AMHR2Q16671 573 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 IMPG1Q17R60 797 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ARSHQ5FYA8 562 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 C16orf87Q6PH81 154 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 SAMD3Q8N6K7 520 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ASAP3Q8TDY4 903 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CKAP2Q8WWK9 683 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ZBTB45Q96K62 511 aaPredicted RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 CDYLQ9Y232 598 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 SDR42E2A6NKP2 422 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 FDFT1P37268 417 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 ARHGDIAP52565 204 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 KPNB1Q14974 876 aaKnown RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 ANGPTL8Q6UXH0 198 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 APTXQ7Z2E3 356 aaKnown RBP11.31□□□□□ -0.6
RNF43-203ENST00000577716 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.31□□□□□ -0.6
RNF43-203ENST00000577716 PDP2Q9P2J9 529 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 KIAA1257Q9ULG3 409 aa11.31□□□□□ -0.6
RNF43-203ENST00000577716 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 PSMD3O43242 534 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 MTSS1O43312 755 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 DRD4P21917 467 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 SERPINB3P29508 390 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms