RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 PRCPP42785 496 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 GCLMP48507 274 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 KPNA1P52294 538 aaPredicted RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 ORC1Q13415 861 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 ADAM9Q13443 819 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 GAS6Q14393 721 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 ZNF268Q14587 947 aaPredicted RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 SGSM1Q2NKQ1 1148 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 TSSK4Q6SA08 328 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 PAQR9Q6ZVX9 377 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 ARL14EPQ8N8R7 260 aaPredicted RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 SPATA20Q8TB22 786 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 TAS1R2Q8TE23 839 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 C8orf48Q96LL4 319 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 CEP295NLQ96MC4 621 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 TTLL2Q9BWV7 592 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 ELOVL4Q9GZR5 314 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 EBF3Q9H4W6 596 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 MMRN2Q9H8L6 949 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 KIF9Q9HAQ2 790 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 PRMT8Q9NR22 394 aaPredicted RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 GOLGA6L4A6NEF3 574 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 CKMP06732 381 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 RPL13P26373 211 aaKnown RBP13.49□□□□□ -0.25
SSH2-205ENST00000577483 ZXDBP98169 803 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 USP4Q13107 963 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 ZNF77Q15935 545 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 EDRF1Q3B7T1 1238 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
SSH2-205ENST00000577483 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 FAM35AQ86V20 835 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 RALGPS2Q86X27 583 aaPredicted RBP13.49□□□□□ -0.25
SSH2-205ENST00000577483 MSANTD3Q96H12 275 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 KCNK16Q96T55 309 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 C8orf33Q9H7E9 229 aaPredicted RBP13.49□□□□□ -0.25
SSH2-205ENST00000577483 LMAN1LQ9HAT1 526 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 APOBEC3GQ9HC16 384 aaKnown RBP13.49□□□□□ -0.25
SSH2-205ENST00000577483 GKN1Q9NS71 199 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 FBXO4Q9UKT5 387 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 PCDHA5Q9Y5H7 936 aa13.49□□□□□ -0.25
SSH2-205ENST00000577483 FAM186AA6NE01 2351 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 TRAV19A0A0A6YYK7 116 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 ARSAP15289 507 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
SSH2-205ENST00000577483 PMS1P54277 932 aaKnown RBP13.48□□□□□ -0.25
SSH2-205ENST00000577483 MCCD1P59942 119 aaPredicted RBP13.48□□□□□ -0.25
SSH2-205ENST00000577483 IFRD2Q12894 506 aaPredicted RBP13.48□□□□□ -0.25
SSH2-205ENST00000577483 MTF1Q14872 753 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 PON2Q15165 354 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 ITPRIPL2Q3MIP1 535 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 Q6ZS52 159 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 TAF4BQ92750 862 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 GSDMAQ96QA5 445 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 TWNKQ96RR1 684 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 THG1LQ9NWX6 298 aaKnown RBP13.48□□□□□ -0.25
SSH2-205ENST00000577483 RALGAPA1Q6GYQ0 2036 aa13.48□□□□□ -0.25
SSH2-205ENST00000577483 DMXL1Q9Y485 3027 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 TRIM49BA6NDI0 452 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 ZNF840PA6NDX5 716 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 BEST1O76090 585 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 USP17L7P0C7H9 530 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 TDGF1P13385 188 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 KRT13P13646 458 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 CCDC130P13994 396 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 NDST1P52848 882 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 CSTF1Q05048 431 aaKnown RBP13.47□□□□□ -0.25
SSH2-205ENST00000577483 ENPEPQ07075 957 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 TAF10Q12962 218 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 RUNX3Q13761 415 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 ZNF528Q3MIS6 628 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 COBLL1Q53SF7 1204 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 TTC16Q8NEE8 873 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 ZMIZ2Q8NF64 920 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 TNIP3Q96KP6 325 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 TMEM8AQ9HCN3 771 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 DCHS1Q96JQ0 3298 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 ZNF292O60281 2723 aa13.47□□□□□ -0.25
SSH2-205ENST00000577483 OLFM2O95897 454 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 P4HA1P13674 534 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 HDCP19113 662 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 INCA1Q0VD86 236 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 CCINQ13939 588 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 NAIF1Q69YI7 327 aaPredicted RBP13.46□□□□□ -0.25
SSH2-205ENST00000577483 ANKRD40Q6AI12 368 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 ZC3H14Q6PJT7 736 aaKnown RBP13.46□□□□□ -0.25
SSH2-205ENST00000577483 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
SSH2-205ENST00000577483 C12orf29Q8N999 325 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 SH3RF2Q8TEC5 729 aa13.46□□□□□ -0.25
SSH2-205ENST00000577483 NELL1Q92832 810 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms